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13_1_40cm_scaffold_2140

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2140_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(76..672)
DNA (597bp) protein (199aa)
metal dependent phosphohydrolase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=GWA2_Rokubacteria_73_35_curated
Metal dependent phosphohydrolase id=1709630 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metal dependent phosphohydrolase
13_1_40cm_scaffold_2140_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(669..1412)
DNA (744bp) protein (248aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cobalamin synthase id=1709629 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cobalamin 5'-phosphate synthase
13_1_40cm_scaffold_2140_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1510..3252
DNA (1743bp) protein (581aa)
pckG; phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) (EC:4.1.1.32) Tax=GWA2_Rokubacteria_73_35_curated
pckG; phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] id=1709628 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2140_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3283..3492)
DNA (210bp) protein (70aa)
histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWA2_Rokubacteria_73_35_curated
Histidine kinase id=2085288 bin=GWA2_Methylomirabilis_73_35 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2140_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3566..5095)
DNA (1530bp) protein (510aa)
propionyl-CoA carboxylase subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative propionyl-CoA carboxylase beta subunit id=4243671 bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
propionyl-CoA carboxylase subunit beta
13_1_40cm_scaffold_2140_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5109..6131)
DNA (1023bp) protein (341aa)
rpoE1; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNA polymerase sigma-E factor id=1709623 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpoE1; RNA polymerase sigma-E factor
13_1_40cm_scaffold_2140_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6191..6646)
DNA (456bp) protein (152aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase id=1709621 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2140_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6663..7310)
DNA (648bp) protein (216aa)
Zinc/iron transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Zinc/iron transporter id=14627800 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Zinc/iron transporter
13_1_40cm_scaffold_2140_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7327..9021
DNA (1695bp) protein (565aa)
General secretion pathway protein E (Type II traffic warden ATPase) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
General secretion pathway protein E (Type II traffic warden ATPase) id=14627801 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
General secretion pathway protein E (Type II traffic warden ATPase)
13_1_40cm_scaffold_2140_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9027..10238
DNA (1212bp) protein (404aa)
gspF; general secretory pathway component, cryptic Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gspF; general secretory pathway component, cryptic id=14627802 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gspF; general secretory pathway component, cryptic
13_1_40cm_scaffold_2140_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10235..10891
DNA (657bp) protein (219aa)
General secretion pathway protein G Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Pseudopilin, cryptic, general secretion pathway id=3269001 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
general secretory pathway protein g, type II secretion system
13_1_40cm_scaffold_2140_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10870..11319
DNA (450bp) protein (150aa)
xpsH; general secretion pathway protein H; K02457 general secretion pathway protein H Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
General secretion pathway protein H id=3269002 bin=GWC2_Methylomirabilis_70_16 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fimT; type IV pilin protein
13_1_40cm_scaffold_2140_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11316..11735
DNA (420bp) protein (140aa)
general secretion pathway protein H; K02458 general secretion pathway protein I Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative General secretion pathway protein I, GspI (Modular protein) id=3269003 bin=GWC2_Methylomirabilis_70_16 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
general secretion pathway protein H
13_1_40cm_scaffold_2140_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11732..12349
DNA (618bp) protein (206aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4806972 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_2140_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12346..13236
DNA (891bp) protein (297aa)
general secretion pathway protein K; K02460 general secretion pathway protein K Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
General secretion pathway protein K id=3269005 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
general secretion pathway protein K
13_1_40cm_scaffold_2140_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13274..14743
DNA (1470bp) protein (490aa)
fimbrial assembly family protein; K02461 general secretion pathway protein L Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fimbrial assembly family protein id=4806970 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fimbrial assembly family protein
13_1_40cm_scaffold_2140_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14740..15318
DNA (579bp) protein (193aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=14628104 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_2140_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15319..16104
DNA (786bp) protein (262aa)
uncharacterized LOC100208015 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4806968 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_2140_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16283..18463
DNA (2181bp) protein (727aa)
general secretion pathway protein D; K02453 general secretion pathway protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
General secretion pathway protein D id=4806967 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
general secretion pathway protein D
13_1_40cm_scaffold_2140_20
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(18531..19025)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI0003456DB9
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_40cm_scaffold_2140_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19049..19831
DNA (783bp) protein (261aa)
photosystem I assembly BtpA; K06971 Tax=GWA2_Rokubacteria_73_35_curated
Photosystem I assembly BtpA id=4048103 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
btpA; photosystem I assembly BtpA
13_1_40cm_scaffold_2140_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19809..20918
DNA (1110bp) protein (370aa)
glycosyl hydrolase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glycoside hydrolase family 3 domain-containing protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] id=14627915 bin=bin7_NC10_sister species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
glycosyl hydrolase
13_1_40cm_scaffold_2140_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20946..21902)
DNA (957bp) protein (319aa)
rbsK; ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribokinase id=4048097 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia multivorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribokinase
13_1_40cm_scaffold_2140_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(21866..22795)
DNA (930bp) protein (310aa)
rih; inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1)
inosine-uridine preferring nucleoside hydrolase Tax=GWA2_Rokubacteria_73_35_curated
Inosine-uridine preferring nucleoside hydrolase id=3968020 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_2140_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22920..23090
DNA (171bp) protein (57aa)
id=3968019 Tax=GWA2_Rokubacteria_70_23_curated
id=14627911 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_2140_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23229..24191)
DNA (963bp) protein (321aa)
acetyl-CoA hydrolase (EC:2.8.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acetyl-CoA hydrolase/transferase id=4048093 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acetyl-CoA hydrolase/transferase
13_1_40cm_scaffold_2140_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24425..25192
DNA (768bp) protein (256aa)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase id=4048086 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-oxoacyl-[acyl-carrier-protein] reductase Tax=GWA2_Rokubacteria_73_35_curated
short-chain dehydrogenase
13_1_40cm_scaffold_2140_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

25271..25687
DNA (417bp) protein (139aa)
Endoribonuclease L-PSP id=4048084 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative endoribonuclease, translation initiation inhibitor (modular protein) Tax=GWA2_Rokubacteria_73_35_curated
putative endoribonuclease
13_1_40cm_scaffold_2140_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

25692..27215
DNA (1524bp) protein (508aa)
NADH:flavin oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
NADH:flavin oxidoreductase/NADH oxidase id=4048083 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADH:flavin oxidoreductase
13_1_40cm_scaffold_2140_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(27112..27591)
DNA (480bp) protein (160aa)
Putative acetyltransferase protein id=2497913 bin=GWC2_Methylomirabilis_70_24 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
N-acetyltransferase GCN5 Tax=GWA2_Rokubacteria_70_23_curated
GCN5 family N-acetyltransferase
Displaying items 1-30 of 57 in total

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