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13_1_40cm_scaffold_21664

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_21664_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..418)
DNA (417bp) protein (139aa)
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RHH0_MOOTA
Molybdopterin-guanine dinucleotide biosynthesis protein B Tax=GWC2_Gemmatimonadetes_71_10_curated
molybdopterin-guanine dinucleotide biosynthesis protein B
13_1_40cm_scaffold_21664_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(400..945)
DNA (546bp) protein (182aa)
molybdopterin-guanine dinucleotide biosynthesis protein A; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2I5_SPHTD
Molybdopterin-guanine dinucleotide biosynthesis protein A
13_1_40cm_scaffold_21664_3
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(948..1361)
DNA (414bp) protein (138aa)
Putative CoA-binding protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KR02_9BURK
Putative CoA-binding protein {ECO:0000313|EMBL:EJE53573.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. C
CoA-binding protein
13_1_40cm_scaffold_21664_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1358..2077)
DNA (720bp) protein (240aa)
formate dehydrogenase family accessory protein (FdhD) Tax=GWC2_Gemmatimonadetes_71_10_curated
formate dehydrogenase
Formate dehydrogenase family accessory protein FdhD id=4638662 bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_scaffold_21664_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2199..2618)
DNA (420bp) protein (140aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSV1_9SPHI
6-pyruvoyl tetrahydrobiopterin synthase
13_1_40cm_scaffold_21664_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2621..3202)
DNA (582bp) protein (194aa)
ABC transporter; K06857 tungstate transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter ATP-binding protein; K06857 tungstate transport system ATP-binding protein id=14430717 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ABC transporter-related protein
13_1_40cm_scaffold_21664_7

Not on your lists

comp(3577..4272)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381E338
Marine sediment metagenome DNA, contig: S01H4_C01422 {ECO:0000313|EMBL:GAG68588.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_21664_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4260..4982)
DNA (723bp) protein (241aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_21664_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4979..6478)
DNA (1500bp) protein (500aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB94_GEMAT
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
13_1_40cm_scaffold_21664_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6495..7538
DNA (1044bp) protein (348aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_scaffold_21664_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7535..7870
DNA (336bp) protein (112aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB89_GEMAT
hypothetical protein
13_1_40cm_scaffold_21664_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7879..9270
DNA (1392bp) protein (464aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB87_GEMAT
13_1_40cm_scaffold_21664_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9357..10793
DNA (1437bp) protein (479aa)
Amino acid permease-associated region n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T9A8_BURPP
amino acid transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amino acid permease-associated protein
13_1_40cm_scaffold_21664_14
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10815..11645
DNA (831bp) protein (277aa)
AlgR/AgrA/LytR family regulatory protein RpfD n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=R9S575_SIMAS
response regulator of the LytR/AlgR family Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
AlgR/AgrA/LytR family regulatory protein RpfD
13_1_40cm_scaffold_21664_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11642..13120
DNA (1479bp) protein (493aa)
Amino acid permease n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAV9_MYXSD
amino acid permease Tax=GWC2_Gemmatimonadetes_71_10_curated
amino acid permease
13_1_40cm_scaffold_21664_16
unknown

Not on your lists

13265..13675
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_scaffold_21664_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13772..14059
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB85_GEMAT
hypothetical protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphoesterase RecJ domain protein
13_1_40cm_scaffold_21664_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14056..14694
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB85_GEMAT
hypothetical protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphoesterase RecJ domain protein
13_1_40cm_scaffold_21664_19
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(14681..15406)
DNA (726bp) protein (242aa)
Zn-dependent hydrolase, glyoxylase id=24456897 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Zn-dependent hydrolase, glyoxylase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Zn-dependent hydrolase, glyoxylase
13_1_40cm_scaffold_21664_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15483..16949
DNA (1467bp) protein (489aa)
hypothetical protein; K13049 carboxypeptidase PM20D1 [EC:3.4.17.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UBZ2_MYXSD
hypothetical protein
13_1_40cm_scaffold_21664_21
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16965..17504)
DNA (540bp) protein (180aa)
Putative serine/threonine protein kinase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EUD7_9NOCA
Serine/threonine protein kinase {ECO:0000313|EMBL:CDR08114.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
putative serine/threonine protein kinase
13_1_40cm_scaffold_21664_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17855..18208
DNA (354bp) protein (118aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_scaffold_21664_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18539..19291
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB84_GEMAT
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase-like, ParA/MinD
13_1_40cm_scaffold_21664_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19620..20000
DNA (381bp) protein (127aa)
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_21664_25
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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20476..21474
DNA (999bp) protein (333aa)
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
two-component hybrid sensor and regulator
Displaying 25 items

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