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13_1_40cm_scaffold_2168

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2168_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..1300)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_2168_2
unknown

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1567..1818
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_scaffold_2168_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1849..2898)
DNA (1050bp) protein (350aa)
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase id=14425745 bin=bin1_lowGC species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase Tax=CSP1_2_Dadabacteria
methionine-R-sulfoxide reductase
13_1_40cm_scaffold_2168_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

3011..3694
DNA (684bp) protein (228aa)
DNA-binding response regulator in two-component system with YedV n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEX8_9CHLR
two component transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
13_1_40cm_scaffold_2168_5
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3687..5099
DNA (1413bp) protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae;
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIF2_MOOTA
sensor signal transduction histidine kinase
13_1_40cm_scaffold_2168_6
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5157..6290)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9S1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFK07512.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
putative 3-carboxymuconate cyclase
13_1_40cm_scaffold_2168_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6414..8153
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037FCAF6
PQQ-dependent dehydrogenase, methanol/ethanol family
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:AHG91607.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_2168_8
unknown

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comp(8006..8662)
DNA (657bp) protein (219aa)

This feature has no annotations

13_1_40cm_scaffold_2168_9

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8701..9309
DNA (609bp) protein (203aa)
Marine sediment metagenome DNA, contig: S01H4_L05693 {ECO:0000313|EMBL:GAG85163.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_scaffold_2168_10
unknown

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comp(9251..9694)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_scaffold_2168_11
unknown

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comp(9784..9978)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_scaffold_2168_12

Not on your lists

comp(10033..11757)
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003639826
FG-GAP repeat-containing protein {ECO:0000313|EMBL:AHN97875.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
FG-GAP repeat domain-containing protein
13_1_40cm_scaffold_2168_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11775..12809)
DNA (1035bp) protein (345aa)
surface antigen
surface antigen id=24659098 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Surface antigen, putative {ECO:0000313|EMBL:ABC44983.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
13_1_40cm_scaffold_2168_14

Not on your lists

comp(12806..15229)
DNA (2424bp) protein (808aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6A155
Uncharacterized protein {ECO:0000313|EMBL:AHN97873.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
hypothetical protein
13_1_40cm_scaffold_2168_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15297..16016)
DNA (720bp) protein (240aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A656_GEMAT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88322.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_2168_16
Geobacillus thermodenitrificans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16068..16346)
DNA (279bp) protein (93aa)
Thioredoxin reductase-like protein n=2 Tax=Geobacillus RepID=A4IQB5_GEOTN
thioredoxin reductase
Thioredoxin reductase-like protein {ECO:0000313|EMBL:ABO67519.1}; TaxID=420246 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus thermodenitrificans (
13_1_40cm_scaffold_2168_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17073..18317
DNA (1245bp) protein (415aa)
Beta-lactamase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJA7_KORVE
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AHG93328.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_2168_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18340..18693
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RFG8_MYCXE
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_2168_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18693..19241
DNA (549bp) protein (183aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_2168_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19195..20622)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS335 RepID=UPI0003699347
PKD domain containing protein
DNA polymerase III subunit alpha Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_2168_21
unknown

Not on your lists

20670..21029
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_scaffold_2168_22
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

21050..22336
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R8A2_PIRSD
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_40cm_scaffold_2168_23
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(22333..23745)
DNA (1413bp) protein (471aa)
Tetratricopeptide repeat protein id=3965264 bin=GWF2_Ignavibacteria_35_20 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
TPR repeat-containing protein Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
hypothetical protein
13_1_40cm_scaffold_2168_24
unknown

Not on your lists

comp(23852..24454)
DNA (603bp) protein (201aa)

This feature has no annotations

13_1_40cm_scaffold_2168_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

24479..24649
DNA (171bp) protein (57aa)
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
UvrD/REP helicase n=1 Tax=Desulfovibrio vulgaris (strain RCH1) RepID=E3IPQ9_DESVR
UvrD/REP helicase
Displaying 25 items

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