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13_1_40cm_scaffold_232

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_232_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1..1191)
DNA (1191bp) protein (397aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ATP-dependent helicase n=1 Tax=uncultured archaeon RepID=Q6MZB0_9ARCH
DEAD/DEAH box helicase
13_1_40cm_scaffold_232_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

1360..1719
DNA (360bp) protein (120aa)
Transcriptional regulator, PadR family n=2 Tax=Clostridiales RepID=B0NE98_CLOSV
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
PadR-like family transcriptional regulator
13_1_40cm_scaffold_232_3
unknown

Not on your lists

1735..2466
DNA (732bp) protein (244aa)

This feature has no annotations

13_1_40cm_scaffold_232_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

2586..3218
DNA (633bp) protein (211aa)
TATA-box-binding protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV1_9CREN
tbp; TATA-box-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
TATA binding protein of transcription factor TFIID
13_1_40cm_scaffold_232_5
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

3236..3775
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSB6_VULDI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN49509.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (s
13_1_40cm_scaffold_232_6
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(3907..4572)
DNA (666bp) protein (222aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=582419 species="Archaea; Euryarchaeota; Th
Ribonuclease HII n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LKR9_THEBM
ribonuclease HII
13_1_40cm_scaffold_232_7
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(4560..5114)
DNA (555bp) protein (185aa)
Nucleoside-triphosphatase THEP1 {ECO:0000255|HAMAP-Rule:MF_00796}; Short=NTPase THEP1 {ECO:0000255|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000255|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phosph
Nucleoside-triphosphatase THEP1 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=NTPTH_THEPD
putative NTPase
13_1_40cm_scaffold_232_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(5111..5749)
DNA (639bp) protein (213aa)
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] Tax=RBG_13_Bathyarchaeota_38_9_curated
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RLME_METTH
cell division protein J
13_1_40cm_scaffold_232_9
R_OP11_Roizmanbacteria_39_9, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(5746..6042)
DNA (297bp) protein (99aa)
Methionine--tRNA ligase n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B5Y7_THEAS
methionyl-tRNA synthetase; K06878 tRNA-binding protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_39_9_curated
methionyl-tRNA synthetase
13_1_40cm_scaffold_232_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6084..7358)
DNA (1275bp) protein (425aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Peptidase M16 domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8P0_SPHTD
peptidase M16 domain-containing protein
13_1_40cm_scaffold_232_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(7348..8694)
DNA (1347bp) protein (449aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_16_Euryarchaeota_67_27_curated
Peptidase M16 domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B202_HERA2
peptidase M16 domain-containing protein
13_1_40cm_scaffold_232_12
uncultured marine crenarchaeote E48-1C, Crenarchaeota, Archaea

Not on your lists

comp(8691..9293)
DNA (603bp) protein (201aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV0_9CREN
13_1_40cm_scaffold_232_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

9411..10622
DNA (1212bp) protein (404aa)
DUF2088 domain protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU8_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_scaffold_232_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

10755..12683
DNA (1929bp) protein (643aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_scaffold_232_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(12977..13747)
DNA (771bp) protein (257aa)
Coenzyme F420-0 gamma-glutamyl ligase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CWL2_METMJ
F420-dependent oxidoreductase Tax=RBG_16_Archaea_50_20_curated
F420-dependent oxidoreductase
13_1_40cm_scaffold_232_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13755..15302)
DNA (1548bp) protein (516aa)
histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RBG_16_Archaea_50_20_curated
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BJ38_PETMO
13_1_40cm_scaffold_232_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15353..17044)
DNA (1692bp) protein (564aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RBG_16_Archaea_50_20_curated
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=HUTU_SYMTH
13_1_40cm_scaffold_232_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(17041..17961)
DNA (921bp) protein (307aa)
hutI; imidazolonepropionase HutI (EC:3.5.2.7) Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI0003721FA4
imidazolonepropionase
13_1_40cm_scaffold_232_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(18333..19238)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HNS5_THES4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_scaffold_232_20
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19592..20845)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Bacillus sp. 105MF RepID=UPI00035C26C1
Nitroreductase {ECO:0000313|EMBL:EEM86226.1}; TaxID=527028 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis serovar pu
SagB-type dehydrogenase domain protein
13_1_40cm_scaffold_232_21

Not on your lists

comp(21084..21551)
DNA (468bp) protein (156aa)
Marine sediment metagenome DNA, contig: S06H3_C01604 {ECO:0000313|EMBL:GAH98155.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_40cm_scaffold_232_22
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(21548..22000)
DNA (453bp) protein (151aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Aeropyrum camini SY1 = JCM 12091 RepID=U3TFT1_9CREN
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
fibrillarin
13_1_40cm_scaffold_232_23
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


comp(22101..23411)
DNA (1311bp) protein (437aa)
rRNA biogenesis protein Nop56/Nop58 n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TCJ1_THEC1
rRNA biogenesis protein Nop56/Nop58; K14564 nucleolar protein 56 Tax=RBG_13_Bathyarchaeota_38_9_curated
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein
13_1_40cm_scaffold_232_24
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

23507..24436
DNA (930bp) protein (310aa)
dihydroorotate dehydrogenase family protein (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RBG_13_Bathyarchaeota_38_9_curated
pyrD; dihydroorotate oxidase B, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5V0_METCZ
13_1_40cm_scaffold_232_25
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(24614..24865)
DNA (252bp) protein (84aa)
GAF domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0G4_THERP
GAF sensor protein; K07170 GAF domain-containing protein Tax=RBG_16_KB1_OP1_55_9_curated
GAF domain-containing protein
13_1_40cm_scaffold_232_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

24993..26711
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00031E1BA7
hypothetical protein; K06888 Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_232_27
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

26794..27285
DNA (492bp) protein (164aa)
Amidohydrolase 3 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C888_SPHTD
Amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ACZ40031.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Spha
Displaying 27 items

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