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13_1_40cm_scaffold_244

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_244_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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1..759
DNA (759bp) protein (253aa)
mch; methenyltetrahydromethanopterin cyclohydrolase (Methenyl-H4MPT cyclohydrolase) (mch) (EC:3.5.4.27) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
mch; methenyltetrahydromethanopterin cyclohydrolase (Methenyl-H4MPT cyclohydrolase) (mch) (EC:3.5.4.27)
Methylene tetrahydromethanopterin cyclohydrolase n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN5_9BACT
13_1_40cm_scaffold_244_2
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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801..1238
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00035E57C1
Uncharacterized protein {ECO:0000313|EMBL:EGD58210.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
ethyl tert-butyl ether degradation EthD
13_1_40cm_scaffold_244_3

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1290..2060
DNA (771bp) protein (257aa)
Orf5 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN4_9BACT
Orf5 {ECO:0000313|EMBL:AAY89280.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
alpha-L-glutamate ligase
13_1_40cm_scaffold_244_4

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2090..2929
DNA (840bp) protein (280aa)
Triphosphoribosyl-dephospho-CoA synthase {ECO:0000256|SAAS:SAAS00100821}; EC=2.4.2.52 {ECO:0000256|SAAS:SAAS00100821};; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bact
Orf7 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN3_9BACT
hypothetical protein
13_1_40cm_scaffold_244_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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2916..3419
DNA (504bp) protein (168aa)
Putative 6-pyruvoyl tetrahydropterin synthase n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS7_9BACT
6-pyruvoyl-tetrahydropterin synthase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
6-pyruvoyl-tetrahydropterin synthase
13_1_40cm_scaffold_244_6

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comp(3398..4150)
DNA (753bp) protein (251aa)
Orf17 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN2_9BACT
Orf17 {ECO:0000313|EMBL:AAY89282.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
histidine biosynthesis protein
13_1_40cm_scaffold_244_7

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4156..5160
DNA (1005bp) protein (335aa)
Conserved protein Orf9 n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS5_9BACT
Conserved protein Orf9 {ECO:0000313|EMBL:AAY96686.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
tetrahydromethanopterin biosynthesis protein
13_1_40cm_scaffold_244_8
Methanoculleus sp. MH98A, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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5157..5789
DNA (633bp) protein (211aa)
Aspartate/glutamate/uridylate kinase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CYB8_METMJ
aspartate/glutamate/uridylate kinase
Uridylate kinase {ECO:0000313|EMBL:KDE55857.1}; TaxID=1495314 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus sp. MH
13_1_40cm_scaffold_244_9
CSP1_5_NC10, NC10, Bacteria

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comp(5652..6470)
DNA (819bp) protein (273aa)
Dihydroneopterin aldolase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QMY2_METTR
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_scaffold_244_10
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6532..7365
DNA (834bp) protein (278aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0X2_NITHN
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADE14529.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitros
13_1_40cm_scaffold_244_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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7387..7746
DNA (360bp) protein (120aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetale
Pterin-4a-carbinolamine dehydratase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJV0_SINAD
pterin-4a-carbinolamine dehydratase
13_1_40cm_scaffold_244_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7743..9185
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67548.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_scaffold_244_13
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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9182..10654
DNA (1473bp) protein (491aa)
aminodeoxychorismate synthase subunit I (EC:2.6.1.85); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85] Tax=RBG_13_Chloroflexi_48_17_curated
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E6109E
para-aminobenzoate synthase subunit I
13_1_40cm_scaffold_244_14
R_NC10_66_22, NC10, Bacteria

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10651..11304
DNA (654bp) protein (218aa)
trpG; anthranilate synthase, component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
trpG; anthranilate synthase component II (EC:4.1.3.27)
TrpG panthranilate synthase component II (Glutamine amido-transferase) protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82Y73_NITEU
13_1_40cm_scaffold_244_15
CSP1_5_NC10, NC10, Bacteria

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11301..11861
DNA (561bp) protein (187aa)
hypothetical protein id=14429012 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_scaffold_244_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

11858..12832
DNA (975bp) protein (325aa)
beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4) id=14429011 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4) Tax=CSP1_5_NC10
beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4)
13_1_40cm_scaffold_244_17
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13043..14809
DNA (1767bp) protein (589aa)
Methanol dehydrogenase subunit 1 n=1 Tax=Azospirillum amazonense Y2 RepID=G1XWM0_9PROT
Methanol dehydrogenase {ECO:0000313|EMBL:KGM31741.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosu
putative methanol dehydrogenase MoxF
13_1_40cm_scaffold_244_18
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14942..15769
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000367365C
methanol oxidation protein
Putative periplasmic binding protein, involved in methanol oxidation {ECO:0000313|EMBL:CCJ08486.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae;
13_1_40cm_scaffold_244_19
unknown

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15816..16292
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_40cm_scaffold_244_20
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16289..17044
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAB6_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB47372.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium ni
13_1_40cm_scaffold_244_21
CSP1_5_NC10, NC10, Bacteria

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17058..18032
DNA (975bp) protein (325aa)
YVTN beta-propeller repeat-containing protein id=14429063 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
YVTN beta-propeller repeat-containing protein Tax=CSP1_5_NC10
40-residue YVTN family beta-propeller repeat protein
13_1_40cm_scaffold_244_22
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(18029..18577)
DNA (549bp) protein (183aa)
hypothetical protein id=14429046 bin=bin3_NC10 species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_scaffold_244_23
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(18671..20284)
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003764620
subtilisin-like serine protease
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACL70511.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Hal
13_1_40cm_scaffold_244_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(20281..20871)
DNA (591bp) protein (197aa)
trmE; putative tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA modification GTPase MnmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
Displaying 24 items

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