ggKbase home page

13_1_40cm_scaffold_2602

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2602_1
unknown

Not on your lists

comp(224..364)
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_scaffold_2602_2
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(388..1365)
DNA (978bp) protein (326aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) Tax=RBG_16_Thaumarchaeota_49_8_curated
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EJ09_9ARCH
13_1_40cm_scaffold_2602_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(1528..2232)
DNA (705bp) protein (235aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6) Tax=RBG_16_Thaumarchaeota_49_8_curated
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003826EBE
13_1_40cm_scaffold_2602_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(2233..2643)
DNA (411bp) protein (137aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RBG_16_Thaumarchaeota_49_8_curated
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TBP4_9EURY
Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
13_1_40cm_scaffold_2602_5
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(2582..3205)
DNA (624bp) protein (208aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVK5_ACEAZ
5-formyltetrahydrofolate cyclo-ligase
13_1_40cm_scaffold_2602_6
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3202..4062)
DNA (861bp) protein (287aa)
methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5)
Bifunctional protein FolD n=2 Tax=Caldicellulosiruptor RepID=E4S528_CALKI
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] li
13_1_40cm_scaffold_2602_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(4059..4682)
DNA (624bp) protein (208aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Putative Formyl transferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATI1_9ARCH
Putative Formyl transferase {ECO:0000313|EMBL:CDI05889.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_scaffold_2602_8

Not on your lists

comp(4687..6219)
DNA (1533bp) protein (511aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
Phosphoribosylamine/glycine ligase n=1 Tax=uncultured archaeon W5-61a RepID=H9BX98_9ARCH
Phosphoribosylamine/glycine ligase {ECO:0000313|EMBL:AFD03420.1}; TaxID=1131008 species="Archaea; environmental samples.;" source="uncultured archaeon W5-61a.;"
13_1_40cm_scaffold_2602_9

Not on your lists

comp(6216..6725)
DNA (510bp) protein (170aa)
Glutamine phosphoribosylpyrophosphate amidotransferase n=1 Tax=uncultured archaeon W5-61a RepID=H9BX97_9ARCH
Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000313|EMBL:AFD03419.1}; TaxID=1131008 species="Archaea; environmental samples.;" source="uncultured archaeon W5-61a.;"
Amidophosphoribosyltransferase
13_1_40cm_scaffold_2602_10
unknown

Not on your lists

7076..7189
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_40cm_scaffold_2602_11
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(7444..8874)
DNA (1431bp) protein (477aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHU9_NITGG
class II glutamine amidotransferase Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_scaffold_2602_12
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8871..11087)
DNA (2217bp) protein (739aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Bathyarchaeota_48_13_curated
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJS1_NITGG
13_1_40cm_scaffold_2602_13
unknown

Not on your lists

comp(11117..11320)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_scaffold_2602_14
unknown

Not on your lists

comp(11324..11530)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_scaffold_2602_15

Not on your lists

comp(11535..12245)
DNA (711bp) protein (237aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421};; Formyl
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=uncultured archaeon W5-61a RepID=H9BX94_9ARCH
13_1_40cm_scaffold_2602_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12379..12651)
DNA (273bp) protein (91aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
Putative phosphoribosylformylglycinamidine synthase PurS n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFC8_NITGG
purS; phosphoribosylformylglycinamidine synthase PurS
13_1_40cm_scaffold_2602_17
R_RIF_OD1_09_54_12, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

12758..13936
DNA (1179bp) protein (393aa)
choline monooxygenase n=1 Tax=Legionella shakespearei RepID=UPI0003700CA9
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_54_12_curated
Rieske (2Fe-2S) domain-containing protein
13_1_40cm_scaffold_2602_18
unknown

Not on your lists

13955..14518
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_scaffold_2602_19
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14635..15309
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VVR4_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX73983.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
hypothetical protein
13_1_40cm_scaffold_2602_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(15422..15931)
DNA (510bp) protein (170aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_scaffold_2602_21
unknown

Not on your lists

16420..16599
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_scaffold_2602_22
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16698..17768
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N666_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ETX03393.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
DUF2332 family protein
13_1_40cm_scaffold_2602_23
unknown

Not on your lists

17946..18500
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_scaffold_2602_24
unknown

Not on your lists

18613..20109
DNA (1497bp) protein (499aa)

This feature has no annotations

13_1_40cm_scaffold_2602_25
unknown

Not on your lists

comp(20187..20984)
DNA (798bp) protein (266aa)

This feature has no annotations

13_1_40cm_scaffold_2602_26
unknown

Not on your lists

21263..21385
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_scaffold_2602_27
unknown

Not on your lists

21682..21807
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 27 items

View Taxonomy