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13_1_40cm_scaffold_2680

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2680_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1..2253
DNA (2253bp) protein (751aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WBV6_9ACTO
integral membrane sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
integral membrane sensor hybrid histidine kinase
13_1_40cm_scaffold_2680_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2250..3269
DNA (1020bp) protein (340aa)
Two-component response regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJX2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_2680_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3271..3645
DNA (375bp) protein (125aa)
Response regulator receiver protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U09_SOLUE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABJ86861.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soliba
13_1_40cm_scaffold_2680_4
Candidatus Actinomarina minuta, Candidatus Actinomarina, Candidatus Actinomarinales, Candidatus Actinomarinidae, Actinobacteria, Bacteria

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3671..4105
DNA (435bp) protein (145aa)
superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase, Ni n=1 Tax=Candidatus Actinomarina minuta RepID=S5DQ68_9ACTN
Superoxide dismutase, Ni {ECO:0000313|EMBL:AGQ19753.1}; TaxID=1389454 species="Bacteria; Actinobacteria; Candidatus Actinomarinidae; Candidatus Actinomarinales; Candidatus Actinomarineae; Candidatus A
13_1_40cm_scaffold_2680_5
unknown

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4119..4412
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_scaffold_2680_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(4424..5218)
DNA (795bp) protein (265aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAJ5_SPHTD
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_2680_7
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5228..5935
DNA (708bp) protein (236aa)
Methyltransferase type 11 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIS4_HALO1
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACY12953.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangi
13_1_40cm_scaffold_2680_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6029..6739)
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Halorubrum RepID=M0DVG1_9EURY id=5224276 bin=16ft_combo_ws3_JS1 species=unknown genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein; K09164 hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_scaffold_2680_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

7023..8585
DNA (1563bp) protein (521aa)
ABC-type dipeptide transport system, periplasmic component id=24439661 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermus islandicus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC-type dipeptide transport system, periplasmic component Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
putative ABC transporter substrate binding protein
13_1_40cm_scaffold_2680_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

8607..9623
DNA (1017bp) protein (339aa)
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ABC transporter permease; K02033 peptide/nickel transport system permease protein id=24439662 bin=RBG_19FT_COMBO_GAL15_69_19 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC transporter permease
13_1_40cm_scaffold_2680_11
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

9616..10440
DNA (825bp) protein (275aa)
Putative ABC transporter permease protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I256_CALAS
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAL99343.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerop
13_1_40cm_scaffold_2680_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(10611..11075)
DNA (465bp) protein (155aa)
hypothetical protein id=14627988 bin=bin7_NC10_sister species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_2680_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11108..12112)
DNA (1005bp) protein (335aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_2680_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12105..12323)
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_2680_15
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(12459..12893)
DNA (435bp) protein (145aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
13_1_40cm_scaffold_2680_16
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13041..14396)
DNA (1356bp) protein (452aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E088_9FIRM
Peptidase U62 modulator of DNA gyrase {ECO:0000313|EMBL:CCO08897.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculu
peptidase U62 modulator of DNA gyrase
13_1_40cm_scaffold_2680_17
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14393..15820)
DNA (1428bp) protein (476aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ08_9FIRM
Peptidase U62, modulator of DNA gyrase {ECO:0000313|EMBL:EAX47859.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus ca
PmbA/TldD protein
13_1_40cm_scaffold_2680_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(16233..17225)
DNA (993bp) protein (331aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
L-threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase n=1 Tax=Bacteriovorax sp. BAL6_X RepID=T0DK81_9DELT
13_1_40cm_scaffold_2680_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17689..18219
DNA (531bp) protein (177aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=28229 species="Bacte
L-threonine 3-dehydrogenase n=1 Tax=Desulfovibrio longus RepID=UPI0003B3BB61
tdh; threonine 3-dehydrogenase, NAD(P)-binding protein
13_1_40cm_scaffold_2680_20
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18230..19423
DNA (1194bp) protein (398aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransfera
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GD97_9DELT
13_1_40cm_scaffold_2680_21
unknown

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19377..19583
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 21 items

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