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13_1_40cm_scaffold_29217

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_29217_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..319
DNA (318bp) protein (106aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] id=14625935 bin=bin7_NC10_sister species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hisD; histidinol dehydrogenase (EC:1.1.1.23)
13_1_40cm_scaffold_29217_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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316..840
DNA (525bp) protein (175aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] id=14625936 bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_29217_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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845..1522
DNA (678bp) protein (226aa)
imidazole glycerol phosphate synthase subunit hisH; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] id=14625937 bin=bin7_NC10_sister species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
imidazole glycerol phosphate synthase subunit hisH
13_1_40cm_scaffold_29217_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(1429..1662)
DNA (234bp) protein (78aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_scaffold_29217_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2253..3023
DNA (771bp) protein (257aa)
imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Imidazole glycerol phosphate synthase subunit HisF id=4246275 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hisF; imidazole glycerol phosphate synthase subunit HisF
13_1_40cm_scaffold_29217_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3020..3670
DNA (651bp) protein (217aa)
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] Tax=RIFCSPLOWO2_02_FULL_
hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein hisIE id=4831887 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_29217_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3677..4183
DNA (507bp) protein (169aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4246273 bin=GWC2_Methylomirabilis_70_16 species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_29217_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4180..4950
DNA (771bp) protein (257aa)
yrbE; toluene ABC transporter subunit membrane protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
yrbE; toluene ABC transporter subunit membrane protein id=14625942 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
yrbE; toluene ABC transporter subunit membrane protein
13_1_40cm_scaffold_29217_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4957..5700
DNA (744bp) protein (248aa)
ABC transporter ATPase; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter; K02065 putative ABC transport system ATP-binding protein id=14625943 bin=bin7_NC10_sister species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
ABC transporter
13_1_40cm_scaffold_29217_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5793..6296
DNA (504bp) protein (168aa)
ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter substrate-binding protein id=14625944 bin=bin7_NC10_sister species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Mce family protein
Displaying 10 items

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