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13_1_40cm_scaffold_3283

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3283_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3..392
DNA (390bp) protein (130aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_3283_2
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(428..3064)
DNA (2637bp) protein (879aa)
DnaQ exonuclease/DinG helicase family protein; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] Tax=GWB2_Chloroflexi_54_36_curated
DnaQ exonuclease/DinG helicase family protein id=1908160 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
DnaQ exonuclease/DinG helicase family protein
13_1_40cm_scaffold_3283_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3205..4479)
DNA (1275bp) protein (425aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glutamate dehydrogenase id=4664613 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_scaffold_3283_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4506..5087)
DNA (582bp) protein (194aa)
ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] id=14628440 bin=bin8_Chloro species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
ATP-dependent DNA ligase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATP dependent DNA ligase, central
13_1_40cm_scaffold_3283_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5459..6343)
DNA (885bp) protein (295aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14631558 bin=bin9_gal15 species=unknown genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_scaffold_3283_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6340..7701)
DNA (1362bp) protein (454aa)
putative protease/transporter; K07403 membrane-bound serine protease (ClpP class) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative protease/transporter; K07403 membrane-bound serine protease (ClpP class) id=24419641 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_scaffold_3283_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

7883..8977
DNA (1095bp) protein (365aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW25_RUBXD
13_1_40cm_scaffold_3283_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8938..10740)
DNA (1803bp) protein (601aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4Y6_SPHTD
phospho-2-dehydro-3-deoxyheptonate aldolase
13_1_40cm_scaffold_3283_9
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10745..11110)
DNA (366bp) protein (122aa)
monofunctional chorismate mutase (EC:5.4.99.5)
Monofunctional chorismate mutase, clade 1 {ECO:0000313|EMBL:AFQ43122.1}; EC=5.4.99.5 {ECO:0000313|EMBL:AFQ43122.1};; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcace
Monofunctional chorismate mutase, clade 1 n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IMU5_DESMD
13_1_40cm_scaffold_3283_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11107..11895)
DNA (789bp) protein (263aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CML7_DESK7
13_1_40cm_scaffold_3283_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11892..13067)
DNA (1176bp) protein (392aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXC1_THERP
13_1_40cm_scaffold_3283_12
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13064..13870)
DNA (807bp) protein (269aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Indole-3-glycerol phosphate synthase n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EH70_AMYSD
trpC; Indole-3-glycerol phosphate synthase
13_1_40cm_scaffold_3283_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13867..14898)
DNA (1032bp) protein (344aa)
anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Anthranilate phosphoribosyltransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EH67_9CHLR
anthranilate phosphoribosyltransferase
13_1_40cm_scaffold_3283_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14898..15656)
DNA (759bp) protein (253aa)
glutamine amidotransferase of anthranilate synthase; K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
trpG; anthranilate synthase component II (EC:4.1.3.27)
Anthranilate synthase component II n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3U0_ACIC5
13_1_40cm_scaffold_3283_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15653..16972)
DNA (1320bp) protein (440aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4Z4_SPHTD
13_1_40cm_scaffold_3283_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(17277..17765)
DNA (489bp) protein (163aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
2'-5' RNA ligase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2B1_THERP
2'-5' RNA ligase
13_1_40cm_scaffold_3283_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(17762..19864)
DNA (2103bp) protein (701aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGB2_THET1
13_1_40cm_scaffold_3283_18
S_OP1_64_32, KB1, Bacteria

Not on your lists

comp(20023..21156)
DNA (1134bp) protein (378aa)
ATPase; tRNA(Ile)-lysidine synthase (EC:6.3.4.-) id=14430107 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
tRNA(Ile)-lysidine synthase Tax=S_OP1_64_32
tRNA(Ile)-lysidine synthetase-like
13_1_40cm_scaffold_3283_19
unknown

Not on your lists

21160..21333
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_scaffold_3283_trna_2
unknown

Not on your lists

comp(21347..21422)
DNA (76bp)
transferRNA
13_1_40cm_scaffold_3283_trna_1
unknown

Not on your lists

comp(21975..22046)
DNA (72bp)
transferRNA
13_1_40cm_scaffold_3283_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(22073..22402)
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_3283_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(22492..23286)
DNA (795bp) protein (265aa)
Beta-lactamase (EC:3.5.2.6) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
beta-lactamase; K01467 beta-lactamase [EC:3.5.2.6] id=17134021 bin=RBG_16_Aminicenantes_63_14 tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_scaffold_3283_22
RBG_16_OP11_44_10_curated, Microgenomates, Bacteria

Not on your lists

comp(23303..23686)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F2674
natural resistance-associated macrophage protein
natural resistance-associated macrophage protein Tax=RBG_16_OP11_44_10_curated
13_1_40cm_scaffold_3283_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(23772..24530)
DNA (759bp) protein (253aa)
Natural resistance-associated macrophage protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SI9_SOLUE
natural resistance-associated macrophage protein
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:ABJ87381.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_1_40cm_scaffold_3283_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(24561..25286)
DNA (726bp) protein (242aa)
PfkB domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CC15_THET1
PfkB domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PfkB domain-containing protein
13_1_40cm_scaffold_3283_25
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(25399..26502)
DNA (1104bp) protein (368aa)
GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GTP-binding protein YchF; K06942 id=14630189 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ychF; GTP-dependent nucleic acid-binding protein EngD
13_1_40cm_scaffold_3283_26
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(26502..27350)
DNA (849bp) protein (283aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] id=14630192 bin=bin8_Chloro species=Ornithinimicrobium pekingense genus=Ornithinimicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
racE; glutamate racemase (EC:5.1.1.3)
glutamate racemase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Displaying 28 items

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