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13_1_40cm_scaffold_389

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_389_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

562..1005
DNA (444bp) protein (148aa)
hypothetical protein id=2322389 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_scaffold_389_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1005..1463
DNA (459bp) protein (153aa)
universal stress protein UspA-like protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
UspA domain-containing protein id=14625462 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_389_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1518..2249)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000372DA38
Uncharacterized protein {ECO:0000313|EMBL:ETX06134.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_scaffold_389_4
unknown

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comp(2463..3071)
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_40cm_scaffold_389_5
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3068..3862)
DNA (795bp) protein (265aa)
photosystem reaction center subunit H n=1 Tax=Methylomicrobium buryatense RepID=UPI00034D0A13
PRC-barrel domain-containing protein
PRC-barrel domain protein {ECO:0000313|EMBL:CCE24249.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomic
13_1_40cm_scaffold_389_6
unknown

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comp(3950..4048)
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_scaffold_389_7
unknown

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comp(4060..4392)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_scaffold_389_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

4455..5369
DNA (915bp) protein (305aa)
pyruvate oxidase (EC:1.2.3.3)
Pyruvate oxidase {ECO:0000313|EMBL:ABJ88235.1}; EC=1.2.3.3 {ECO:0000313|EMBL:ABJ88235.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Soli
Pyruvate oxidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q35_SOLUE
13_1_40cm_scaffold_389_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5397..6065
DNA (669bp) protein (223aa)
id=14430011 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
peptidase M48 Ste24p Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
peptidase M48 Ste24p
13_1_40cm_scaffold_389_10
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6112..6894)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BBY5_9RHIZ
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KIF65909.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
13_1_40cm_scaffold_389_11
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6976..7863
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IIT5_9BRAD
Transcriptional regulator {ECO:0000313|EMBL:KIF65888.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
HTH-type transcriptional regulator
13_1_40cm_scaffold_389_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7878..10625)
DNA (2748bp) protein (916aa)
Protein export membrane protein, SecD/SecF family id=14625644 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Protein export membrane protein, SecD/SecF family Tax=CSP1_6_Rokubacteria
Protein export membrane protein, SecD/SecF family
13_1_40cm_scaffold_389_13
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10634..11614)
DNA (981bp) protein (327aa)
Putative uncharacterized protein id=4578956 bin=GWA2_Elusimicrobia_69_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein Tax=GWA2_Elusimicrobia_69_24_curated
hypothetical protein
13_1_40cm_scaffold_389_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11611..14247)
DNA (2637bp) protein (879aa)
radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Radical SAM domain protein id=2216072 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Radical SAM superfamily protein
13_1_40cm_scaffold_389_15
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14244..15455)
DNA (1212bp) protein (404aa)
hopanoid biosynthesis associated glycosyl transferase protein HpnI; K00720 ceramide glucosyltransferase [EC:2.4.1.80] Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI000372C693
glycosyl transferase, family 2
13_1_40cm_scaffold_389_16
unknown

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comp(15590..15883)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_scaffold_389_17
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16043..17194
DNA (1152bp) protein (384aa)
Amidohydrolase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FRX4_SORC5
TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
amidohydrolase
13_1_40cm_scaffold_389_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17214..17468)
DNA (255bp) protein (85aa)
Extracellular solute-binding protein family 5 id=4793584 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Extracellular solute-binding protein family 5 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_389_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(17521..19095)
DNA (1575bp) protein (525aa)
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
13_1_40cm_scaffold_389_20
unknown

Not on your lists

19409..20362
DNA (954bp) protein (318aa)

This feature has no annotations

Displaying 20 items

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