ggKbase home page

13_1_40cm_scaffold_4271

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4271_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

28..723
DNA (696bp) protein (232aa)
3-oxoacid CoA-transferase, subunit A; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5)
3-oxoacid CoA-transferase subunit A id=3062985 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
13_1_40cm_scaffold_4271_2
unknown

Not on your lists

737..1129
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_scaffold_4271_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

1151..1822
DNA (672bp) protein (224aa)
dxnH; 3-oxoadipate CoA-succinyl transferase, beta subunit (EC:2.8.3.5); K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
dxnH; 3-oxoadipate CoA-succinyl transferase subunit beta (EC:2.8.3.5)
3-oxoadipate CoA-succinyl transferase, beta subunit n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3E0_ACIC5
13_1_40cm_scaffold_4271_4
unknown

Not on your lists

1865..2215
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_scaffold_4271_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

2323..2631
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG41_CHLTF
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_scaffold_4271_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

2723..3286
DNA (564bp) protein (188aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
CDP-alcohol phosphatidyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJF5_KORVE
CDP-alcohol phosphatidyltransferase
13_1_40cm_scaffold_4271_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3364..4284)
DNA (921bp) protein (307aa)
rhomboid family protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rhomboid family protein id=14431019 bin=bin3_NC10 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin3_NC10 organism_group=NC10
rhomboid family protein
13_1_40cm_scaffold_4271_8
unknown

Not on your lists

4367..4630
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_scaffold_4271_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

5018..5509
DNA (492bp) protein (164aa)
Rare lipoprotein A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PV4_SOLUE
rare lipoprotein A; K03642 rare lipoprotein A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
rare lipoprotein A
13_1_40cm_scaffold_4271_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5506..5850
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI00035E784E
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
histidine triad nucleotide-binding protein (HIT)
13_1_40cm_scaffold_4271_11
unknown

Not on your lists

comp(5871..6356)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_scaffold_4271_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

6613..8871
DNA (2259bp) protein (753aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003812B3C
serine/threonin protein kinase
Serine/threonine protein kinase with TPR repeats {ECO:0000313|EMBL:ABJ84784.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_1_40cm_scaffold_4271_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8953..9771
DNA (819bp) protein (273aa)
Dipeptidyl-peptidase IV {ECO:0000313|EMBL:ABF39061.1}; EC=3.4.14.5 {ECO:0000313|EMBL:ABF39061.1};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363CE67
peptidase S9B, dipeptidylpeptidase IV-like
13_1_40cm_scaffold_4271_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9768..11186
DNA (1419bp) protein (473aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:CDM64452.1}; EC=3.4.14.5 {ECO:0000313|EMBL:CDM64452.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363CE67
Putative dipeptidyl peptidase IV
13_1_40cm_scaffold_4271_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11145..11651)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TV8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86912.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_scaffold_4271_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11902..12843
DNA (942bp) protein (314aa)
Beta-lactamase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIZ9_KORVE
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ABF43151.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versati
13_1_40cm_scaffold_4271_17
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13666..15054)
DNA (1389bp) protein (463aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TFV3_BURPP
NodT family RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ACD20209.1}; Flags: Precursor;; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkho
13_1_40cm_scaffold_4271_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(15054..16274)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003679273
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
RND family efflux transporter MFP subunit
13_1_40cm_scaffold_4271_19
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16334..19525)
DNA (3192bp) protein (1064aa)
Acriflavin resistance protein n=2 Tax=Ralstonia pickettii RepID=B2UK79_RALPJ
RND transporter {ECO:0000313|EMBL:KJJ95611.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
acriflavin resistance protein
13_1_40cm_scaffold_4271_20
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(19740..20624)
DNA (885bp) protein (295aa)
adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LS04_SYNAS
13_1_40cm_scaffold_4271_21
unknown

Not on your lists

21075..22010
DNA (936bp) protein (312aa)

This feature has no annotations

13_1_40cm_scaffold_4271_22
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(22111..22836)
DNA (726bp) protein (242aa)
FHA domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
FHA domain-containing protein id=1718584 bin=GWA2_Elusimicrobia_66_18 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
FHA domain-containing protein
13_1_40cm_scaffold_4271_23
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(22838..23173)
DNA (336bp) protein (112aa)
protein serine/threonine phosphatase; K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Serine/threonine protein phosphatase id=2217422 bin=GWA2_Elusimicrobia_69_24 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Ser/Thr phosphatase
13_1_40cm_scaffold_4271_24
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(23223..23609)
DNA (387bp) protein (129aa)
pph1; pp2C-family Ser/Thr protein phosphatase (EC:3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
protein phosphatase 2C-like protein; K01090 protein phosphatase [EC:3.1.3.16] id=12557201 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
serine/threonine protein phosphatase (EC:3.1.3.16)
13_1_40cm_scaffold_4271_25
unknown

Not on your lists

comp(23833..24351)
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_40cm_scaffold_4271_26
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25153..26520
DNA (1368bp) protein (456aa)
RmuC-domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CLY4_DESK7
RmuC-domain-containing protein
RmuC-domain protein {ECO:0000313|EMBL:AEG14127.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (stra
13_1_40cm_scaffold_4271_27
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(26590..26922)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEJ5_TERRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL87663.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus
Displaying 27 items

View Taxonomy