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13_1_40cm_scaffold_456

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_456_1

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2..667
DNA (666bp) protein (222aa)
Beta-lactamase n=1 Tax=uncultured bacterium 270 RepID=E3T6T7_9BACT
Beta-lactamase {ECO:0000313|EMBL:ADC36031.1}; TaxID=698387 species="Bacteria; environmental samples.;" source="uncultured bacterium 270.;"
penicillin-binding protein, beta-lactamase class C
13_1_40cm_scaffold_456_2
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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698..1264
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ERK7_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI52248.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2953
13_1_40cm_scaffold_456_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1261..1680
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFM9_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72199.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_1_40cm_scaffold_456_4
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1677..3140
DNA (1464bp) protein (488aa)
Putative uncharacterized protein n=1 Tax=uncultured nuHF2 cluster bacterium HF0500_31B05 RepID=E7C5Y0_9BACT
hypothetical protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
hypothetical protein
13_1_40cm_scaffold_456_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2966..3934)
DNA (969bp) protein (323aa)
qor; quinone oxidoreductase (EC:1.6.5.5) Tax=GWA2_Rokubacteria_73_35_curated
Quinone oxidoreductase (NADPH:quinone reductase) id=4380010 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alcohol dehydrogenase zinc-binding domain protein
13_1_40cm_scaffold_456_6
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3969..4244)
DNA (276bp) protein (92aa)
ThiamineS protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J682_ANAD2
sulfur carrier protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ACL66977.1}; Flags: Precursor;; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromy
13_1_40cm_scaffold_456_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4270..5397)
DNA (1128bp) protein (376aa)
Threonine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE0_ANADF
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ABS27786.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
13_1_40cm_scaffold_456_8
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(5501..6619)
DNA (1119bp) protein (373aa)
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1) id=14626843 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aspartate/tyrosine/aromatic aminotransferase Tax=RBG_16_Armatimonadetes_67_12_curated
class I and II aminotransferase
13_1_40cm_scaffold_456_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6737..7258)
DNA (522bp) protein (174aa)
Elongation factor P n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFP_GEMAT
efp; elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Elongation factor P
13_1_40cm_scaffold_456_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8936..9814
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA91_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_456_11
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10083..10496
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XW15_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXU87091.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
13_1_40cm_scaffold_456_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10619..11554
DNA (936bp) protein (312aa)
L-proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
proline dehydrogenase (EC:1.5.99.8)
Proline dehydrogenase id=4924569 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_scaffold_456_13
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11628..12497
DNA (870bp) protein (290aa)
Aminotransferase class V n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q277_CATAD
class V aminotransferase
Class V aminotransferase {ECO:0000313|EMBL:AJT63872.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
13_1_40cm_scaffold_456_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12514..12762
DNA (249bp) protein (83aa)
Probable class-V aminotransferase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WMW8_9ACTO
class V aminotransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cysteine desulfurase
13_1_40cm_scaffold_456_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12780..13307
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC68_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_456_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(13317..14162)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN20_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68120.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_scaffold_456_17
unknown

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14568..14828
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_scaffold_456_18
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

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comp(14863..15792)
DNA (930bp) protein (310aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PKH1_9CYAN
response regulator receiver modulated diguanylate cyclase
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:AFY33289.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC
13_1_40cm_scaffold_456_19
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(15894..16526)
DNA (633bp) protein (211aa)
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
LuxR family transcriptional regulator
13_1_40cm_scaffold_456_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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16635..18134
DNA (1500bp) protein (500aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JFQ7_ANAD2 id=5223517 bin=16ft_combo_ws3_JS1 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_scaffold_456_21
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(18097..18915)
DNA (819bp) protein (273aa)
Putative transmembrane anti-sigma factor n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG29_9CHLR
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EFH88731.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kt
putative transmembrane anti-sigma factor
13_1_40cm_scaffold_456_22
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(18917..19444)
DNA (528bp) protein (176aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG28_9CHLR
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH88730.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sou
RNA polymerase sigma factor
13_1_40cm_scaffold_456_23
unknown

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comp(19689..20006)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_scaffold_456_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(20095..20712)
DNA (618bp) protein (206aa)
hypothetical protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IE67_ANADE
hypothetical protein
13_1_40cm_scaffold_456_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(20696..21781)
DNA (1086bp) protein (362aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Xanthine and Co dehydrogenase maturation factor id=4186361 bin=GWF2_Lentisphaerae_57_35 species=Halosarcina pallida genus=Halosarcina taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
XshC-Cox1-family protein
13_1_40cm_scaffold_456_26
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(21765..22916)
DNA (1152bp) protein (384aa)
VWA containing CoxE family protein id=4590706 bin=GWC2_Chloroflexi_73_18 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
VWA containing CoxE family protein; K07161 Tax=GWC2_RIF_CHLX_73_18_curated
VWA containing CoxE family protein
13_1_40cm_scaffold_456_27
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(22913..23824)
DNA (912bp) protein (304aa)
ATPase associated with various cellular activities, AAA_5 id=4590705 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ATPase Tax=GWC2_RIF_CHLX_73_18_curated
ATPase
13_1_40cm_scaffold_456_28
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(23836..24297)
DNA (462bp) protein (154aa)
Carbon monoxide dehydrogenase subunit G n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6U2_9CHLR
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:EFH80703.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kte
carbon monoxide dehydrogenase subunit G
13_1_40cm_scaffold_456_29
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(24297..25154)
DNA (858bp) protein (286aa)
carbon-monoxide dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=GWC2_RIF_CHLX_73_18_curated
Carbon monoxide dehydrogenase, medium subunit id=4729351 bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
molybdopterin dehydrogenase FAD-binding protein
13_1_40cm_scaffold_456_30
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(25151..27517)
DNA (2367bp) protein (789aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WU36_KYRT2
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ADG07288.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Displaying items 1-30 of 38 in total

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