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13_1_40cm_scaffold_49

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_49_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(2..553)
DNA (552bp) protein (184aa)
uppS; undecaprenyl pyrophosphate synthase (EC:2.5.1.31) Tax=RBG_13_Bathyarchaeota_38_9_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4V7_9ARCH
13_1_40cm_scaffold_49_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(547..1353)
DNA (807bp) protein (269aa)
Pnp; purine nucleoside phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_16_Archaea_50_20_curated
methylthioadenosine phosphorylase (EC:2.4.2.28)
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T9Y4_METSL
13_1_40cm_scaffold_49_3
Sulfolobus acidocaldarius, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(1350..2114)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI00036BCEBC
hypothetical protein
Conserved Archaeal protein {ECO:0000313|EMBL:AAY80674.1}; TaxID=330779 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus acidocaldarius (stra
13_1_40cm_scaffold_49_4
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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2219..2902
DNA (684bp) protein (228aa)
Pheromone shutdown protein n=1 Tax=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) RepID=Q8U181_PYRFU
pheromone shutdown protein
Pheromone shutdown protein {ECO:0000313|EMBL:AAL81470.1}; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus (strain
13_1_40cm_scaffold_49_5
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(3095..3925)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI00036AC969
competence damage-inducible protein A; K03742 competence/damage-inducible protein CinA Tax=RBG_16_Bathyarchaeota_48_13_curated
putative molybdopterin binding protein
13_1_40cm_scaffold_49_6
Candidatus Acidianus copahuensis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(3952..4629)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000366DCDF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZQ06826.1}; TaxID=1160895 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Acidianus.;" source="Candidatus Acidianus copahuensis.;
13_1_40cm_scaffold_49_7
unknown

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comp(4683..5930)
DNA (1248bp) protein (416aa)

This feature has no annotations

13_1_40cm_scaffold_49_8
unknown

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5934..6101
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_scaffold_49_9
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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6098..6598
DNA (501bp) protein (167aa)
N-acetyltransferase GCN5 id=14632404 bin=bin9_gal15 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
N-acetyltransferase GCN5 Tax=CSP1_3_Armatimonadetes
N-acetyltransferase GCN5
13_1_40cm_scaffold_49_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(6653..6880)
DNA (228bp) protein (76aa)
Marine sediment metagenome DNA, contig: S01H1_S32854 Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_49_11
unknown

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7182..7745
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_scaffold_49_12
RBG_16_Archaea_50_20_curated, Archaea

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7966..8343
DNA (378bp) protein (126aa)
Ribosomal protein S8e n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EH50_PYRF1
30S ribosomal protein S8e; K02995 small subunit ribosomal protein S8e Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S8e
13_1_40cm_scaffold_49_13
RBG_16_Archaea_50_20_curated, Archaea

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8363..8686
DNA (324bp) protein (108aa)
Signal recognition particle 19 kDa protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBK0_METEZ
signal recognition particle, subunit SRP19 (SRP19); K03105 signal recognition particle subunit SRP19 Tax=RBG_16_Archaea_50_20_curated
ribonucleoprotein complex SRP, Srp19 component
13_1_40cm_scaffold_49_14
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8694..9383)
DNA (690bp) protein (230aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1156417 species="Bac
L-threonine 3-dehydrogenase n=1 Tax=Desmospora sp. 8437 RepID=F5SC14_9BACL
L-threonine 3-dehydrogenase
13_1_40cm_scaffold_49_15
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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9849..10967
DNA (1119bp) protein (373aa)
pyridoxal phosphate-dependent acyltransferase (EC:2.3.1.29)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036F62FC
7-keto-8-aminopelargonate synthetase-like enzyme Tax=RBG_13_Euryarchaeota_31_8_curated
13_1_40cm_scaffold_49_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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10981..11517
DNA (537bp) protein (179aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LPX1_9EURY
sortase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
sortase
13_1_40cm_scaffold_49_17
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11704..12684
DNA (981bp) protein (327aa)
Putative phosphosugar isomerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICE4_NITGG
phosphosugar isomerase
Putative phosphosugar isomerase {ECO:0000313|EMBL:AIF84349.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candida
13_1_40cm_scaffold_49_18
unknown

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12784..13086
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_scaffold_49_19

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comp(13273..13896)
DNA (624bp) protein (208aa)
Haloacid dehalogenase-like hydrolase domain protein {ECO:0000313|EMBL:EQD41700.1}; EC=3.-.-.- {ECO:0000313|EMBL:EQD41700.1};; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenome
serB; SerB protein (EC:3.1.3.3)
Haloacid dehalogenase-like hydrolase domain protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AI98_9ZZZZ
13_1_40cm_scaffold_49_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(13965..15011)
DNA (1047bp) protein (349aa)
Glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037DA33D
glycine hydroxymethyltransferase
13_1_40cm_scaffold_49_21
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(15164..15571)
DNA (408bp) protein (136aa)
30S ribosomal protein S11 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF1_METFV
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S11P
13_1_40cm_scaffold_49_22
unknown

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comp(15693..16406)
DNA (714bp) protein (238aa)

This feature has no annotations

13_1_40cm_scaffold_49_23
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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16582..18918
DNA (2337bp) protein (779aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;
DNA polymerase n=1 Tax=Thermofilum sp. 1910b RepID=S5Z6M3_9CREN
DNA polymerase
13_1_40cm_scaffold_49_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(18908..20185)
DNA (1278bp) protein (426aa)
DNA primase DnaG n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=DNAG_PYRAB
DNA primase Tax=RBG_16_Archaea_50_20_curated
Hypothetical protein
13_1_40cm_scaffold_49_25
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21184..22221
DNA (1038bp) protein (346aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59); K00150 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) [EC:1.2.1.59] Tax=CG_Solirubrobact_01
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase, type II n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0H8_DEHLB
13_1_40cm_scaffold_49_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


22359..23873
DNA (1515bp) protein (505aa)
phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RBG_16_Archaea_50_20_curated
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPR7_THELI
phenylalanyl-tRNA synthetase
13_1_40cm_scaffold_49_27
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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23959..25560
DNA (1602bp) protein (534aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RBG_13_Bathyarchaeota_46_16b_curated
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=2 Tax=Pyrococcus furiosus RepID=SYFB_PYRFU
13_1_40cm_scaffold_49_28

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25564..26718
DNA (1155bp) protein (385aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=115547 species="Archaea;
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=uncultured archaeon RepID=G3C972_9ARCH
13_1_40cm_scaffold_49_29
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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26773..27678
DNA (906bp) protein (302aa)
methionine aminopeptidase, type ii (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RBG_13_Bathyarchaeota_38_9_curated
methionine aminopeptidase, type II (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INA9_NITGG
13_1_40cm_scaffold_49_30
unknown

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comp(27895..28284)
DNA (390bp) protein (130aa)

This feature has no annotations

Displaying items 1-30 of 85 in total

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