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13_1_40cm_scaffold_5055

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5055_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1..759
DNA (759bp) protein (253aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_5055_2
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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894..1586
DNA (693bp) protein (231aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2] Tax=GWC2_RIF_CHLX_73_18_curated
ROK family protein id=4531705 bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ROK family protein
13_1_40cm_scaffold_5055_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1646..2665
DNA (1020bp) protein (340aa)
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC:1.2.1.12) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase (NAD+) n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYC7_9BACT
13_1_40cm_scaffold_5055_4
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

2628..2969
DNA (342bp) protein (114aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RBG_16_Chloroflexi_48_8_curated
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4J2_ANATU
13_1_40cm_scaffold_5055_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3094..3777
DNA (684bp) protein (228aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=2 Tax=Chloroflexus RepID=PGK_CHLAA
13_1_40cm_scaffold_5055_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3803..5122
DNA (1320bp) protein (440aa)
phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Enolase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CJV8_THEYO
eno; phosphopyruvate hydratase
13_1_40cm_scaffold_5055_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5428..5682)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4982F
rpsT; 30S ribosomal protein S20 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_5055_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5922..7277
DNA (1356bp) protein (452aa)
hypothetical protein; K03980 virulence factor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Virulence factor MviN id=1781626 bin=GWD2_Chloroflexi_49_16 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_scaffold_5055_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7324..7992
DNA (669bp) protein (223aa)
Channel protein, hemolysin III family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H9L2_ANADF
hemolysin III family channel protein
Channel protein, hemolysin III family {ECO:0000313|EMBL:ABS25408.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxob
13_1_40cm_scaffold_5055_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8024..9835
DNA (1812bp) protein (604aa)
Elongation factor 4 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C337_SPHTD
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GTP-binding protein LepA
13_1_40cm_scaffold_5055_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9832..10359
DNA (528bp) protein (176aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_5055_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10359..11513
DNA (1155bp) protein (385aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2N2_THERP
13_1_40cm_scaffold_5055_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

12129..13058
DNA (930bp) protein (310aa)
atm:ANT_25070 hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=1245009 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hrcA; heat-inducible transcription repressor HrcA
13_1_40cm_scaffold_5055_14
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

13072..13590
DNA (519bp) protein (173aa)
Protein GrpE id=4531816 bin=GWC2_Chloroflexi_73_18 species=uncultured bacterium 148 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=GWC2_RIF_CHLX_73_18_curated
grpE; protein GrpE
13_1_40cm_scaffold_5055_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13593..15521
DNA (1929bp) protein (643aa)
chaperone protein DnaK (EC:1.3.1.74); K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
chaperone protein DnaK (EC:1.3.1.74)
Chaperone protein DnaK n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCZ1_THET1
13_1_40cm_scaffold_5055_16

Not on your lists

15670..16107
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JPS2_STRHJ
Uncharacterized protein {ECO:0000313|EMBL:KKN11472.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_scaffold_5055_17
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

16187..16783
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQA3_MARHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB11414.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (st
13_1_40cm_scaffold_5055_18
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(17601..18149)
DNA (549bp) protein (183aa)
DNA-3-methyladenine glycosylase i (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
DNA-3-methyladenine glycosylase I id=4012669 bin=GWA2_OP3_52_12 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
13_1_40cm_scaffold_5055_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18187..19053)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Q7_SPHTD
ClpP class periplasmic serine protease {ECO:0000313|EMBL:KCZ73438.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Meth
hypothetical protein
13_1_40cm_scaffold_5055_20
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19053..19562)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KGG7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE76430.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
13_1_40cm_scaffold_5055_21
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19598..20713
DNA (1116bp) protein (372aa)
Chaperone protein DnaJ n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3Y2_PELTS
DnaJ; DnaJ-class molecular chaperone
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicu
13_1_40cm_scaffold_5055_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

20745..21575
DNA (831bp) protein (277aa)
prmA; ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Ribosomal protein L11 methyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4F5_SPHTD
50S ribosomal protein L11 methyltransferase
13_1_40cm_scaffold_5055_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

21581..22336
DNA (756bp) protein (252aa)
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J7F0_DESRM
16S ribosomal RNA methyltransferase RsmE
13_1_40cm_scaffold_5055_24
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(22688..23203)
DNA (516bp) protein (172aa)
hypothetical protein Tax=RBG_13_Chloroflexi_52_12_curated
membrane protein
Displaying 24 items

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