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13_1_40cm_scaffold_529

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_529_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..1026)
DNA (1026bp) protein (342aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=1906301 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_529_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1034..1531)
DNA (498bp) protein (166aa)
id=3674960 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative O-methyltransferase id=2479228 bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_529_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1740..2132)
DNA (393bp) protein (131aa)
UPF0076 protein id=14626972 bin=bin7_NC10_sister species=Saccharomonospora saliphila genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
UPF0076 protein Tax=CSP1_6_Rokubacteria
endoribonuclease L-PSP
13_1_40cm_scaffold_529_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

2247..3458
DNA (1212bp) protein (404aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00035F2DB1
13_1_40cm_scaffold_529_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3471..4004)
DNA (534bp) protein (178aa)
carboxymuconolactone decarboxylase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alkylhydroperoxidase id=3879302 bin=GWC2_Methylomirabilis_70_16 species=Mesorhizobium alhagi genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_529_6
unknown

Not on your lists

comp(4041..4295)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_scaffold_529_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4363..5220)
DNA (858bp) protein (286aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=3850604 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_529_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5279..5422
DNA (144bp) protein (48aa)
NAD-dependent DNA ligase LigA Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_529_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5468..6640
DNA (1173bp) protein (391aa)
diguanylate cyclase Tax=GWA2_Rokubacteria_73_35_curated
Diguanylate cyclase id=3850608 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
diguanylate cyclase
13_1_40cm_scaffold_529_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6651..7058)
DNA (408bp) protein (136aa)
pyridoxamine 5'-phosphate oxidase FMN-binding protein Tax=GWC2_Rokubacteria_70_16_curated
Ppox class probable f420-dependent enzyme, family id=4766433 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_529_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7070..7930)
DNA (861bp) protein (287aa)
alpha/beta hydrolase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
alpha/beta hydrolase family protein id=14627252 bin=bin7_NC10_sister species=Nocardiopsis alba genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase family protein
13_1_40cm_scaffold_529_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7927..8685)
DNA (759bp) protein (253aa)
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NAD-dependent epimerase/dehydratase id=4911885 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia graminis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_529_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8698..9828)
DNA (1131bp) protein (377aa)
Beta-lactamase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5Y6_9PROT
penicillin-binding protein, beta-lactamase class C Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
penicillin-binding protein, beta-lactamase class C
13_1_40cm_scaffold_529_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9852..11084)
DNA (1233bp) protein (411aa)
transglutaminase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transglutaminase-like enzyme, predicted cysteine protease id=4327978 bin=GWA2_Methylomirabilis_73_35 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transglutaminase-like enzyme, predicted cysteine protease
13_1_40cm_scaffold_529_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11805..13130)
DNA (1326bp) protein (442aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4327976 bin=GWA2_Methylomirabilis_73_35 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_529_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(13144..14082)
DNA (939bp) protein (313aa)
ATPase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ATPase associated with various cellular activities AAA_3 id=4327974 bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATPase associated with various cellular activities AAA_3
13_1_40cm_scaffold_529_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14093..14323)
DNA (231bp) protein (77aa)
ahpC; alkyl hydroperoxide reductase, peroxiredoxin
peroxiredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Thiol-specific antioxidant protein id=4327972 bin=GWA2_Methylomirabilis_73_35 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_529_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(14429..14659)
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=4327970 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_529_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14893..15060
DNA (168bp) protein (56aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_scaffold_529_20
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

15218..15637
DNA (420bp) protein (140aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_scaffold_529_21
unknown

Not on your lists

comp(15953..16144)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_scaffold_529_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16224..17213)
DNA (990bp) protein (330aa)
aldo/keto reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aldo/keto reductase id=4911286 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative aldoketoreductase
13_1_40cm_scaffold_529_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17389..17850
DNA (462bp) protein (154aa)
Putative uncharacterized protein id=4677000 bin=GWF2_Methylomirabilis_70_14 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_529_24
unknown

Not on your lists

comp(18094..18699)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_40cm_scaffold_529_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18947..20020
DNA (1074bp) protein (358aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4541118 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_529_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20164..20934)
DNA (771bp) protein (257aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=4306933 bin=GWF2_Methylomirabilis_70_14 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_529_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(20994..23732)
DNA (2739bp) protein (913aa)
two-component sensor histidine kinase Tax=GWA2_Rokubacteria_73_35_curated
Multi-sensor signal transduction histidine kinase id=4558719 bin=GWA2_Methylomirabilis_73_35 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative two-component sensor histidine kinase
13_1_40cm_scaffold_529_28
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23746..24729)
DNA (984bp) protein (328aa)
ABC transporter substrate-binding protein; K01989 putative ABC transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14625735 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_529_29
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(24941..26740)
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D69514
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein
Displaying 29 items

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