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13_1_40cm_scaffold_55

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_55_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..510)
DNA (510bp) protein (170aa)
aminopeptidase P (EC:3.4.11.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aminopeptidase P (EC:3.4.11.9)
Xaa-Pro aminopeptidase id=4148509 bin=GWA2_Methylomirabilis_73_35 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_55_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

547..1689
DNA (1143bp) protein (381aa)
alkanal monooxygenase id=14627403 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alkanal monooxygenase Tax=CSP1_6_Rokubacteria
alkanal monooxygenase
13_1_40cm_scaffold_55_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2846..3151
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GF9_BURXL
Uncharacterized protein {ECO:0000313|EMBL:ETX04464.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
antibiotic biosynthesis monooxygenase family protein
13_1_40cm_scaffold_55_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3209..3742)
DNA (534bp) protein (178aa)
3-hydroxyanthranilate 3,4-dioxygenase; K00452 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] id=7716989 bin=BACIGN_2 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6)
Uncharacterized protein {ECO:0000313|EMBL:ETX03838.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_scaffold_55_5
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(3873..4775)
DNA (903bp) protein (301aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Volvox carteri RepID=D8U5Z3_VOLCA
Putative uncharacterized protein {ECO:0000313|EMBL:EFJ44845.1}; Flags: Fragment;; TaxID=3067 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox.;" so
Formamidopyrimidine-DNA glycosylase
13_1_40cm_scaffold_55_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4821..6449
DNA (1629bp) protein (543aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWC2_Rokubacteria_70_16_curated
Acetolactate synthase id=4736650 bin=GWC2_Methylomirabilis_70_16 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_55_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6483..7691
DNA (1209bp) protein (403aa)
Putative acyl-CoA dehydrogenase id=3814357 bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative acyl-CoA dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
putative acyl-CoA dehydrogenase
13_1_40cm_scaffold_55_8
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8229..9410
DNA (1182bp) protein (394aa)
Methicillin resistance protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IXA0_METNO
Methicillin resistance protein rbh
Methicillin resistance protein {ECO:0000313|EMBL:ACL63141.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylo
13_1_40cm_scaffold_55_9
Edhazardia aedis, Edhazardia, Microsporidia, Fungi

Not on your lists

9645..9956
DNA (312bp) protein (104aa)
Uncharacterized protein (Fragment) n=1 Tax=Edhazardia aedis (strain USNM 41457) RepID=J8ZXK3_EDHAE
Uncharacterized protein {ECO:0000313|EMBL:EJW04418.1}; Flags: Fragment;; TaxID=1003232 species="Eukaryota; Fungi; Microsporidia; Edhazardia.;" source="Edhazardia aedis (strain USNM 41457) (Microsporid
hypothetical protein
13_1_40cm_scaffold_55_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10167..12665
DNA (2499bp) protein (833aa)
peptidase M50 n=1 Tax=Schlesneria paludicola RepID=UPI00029A5419
peptidase M50 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
peptidase M50
13_1_40cm_scaffold_55_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12670..13641
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003631FCE
Uncharacterized protein {ECO:0000313|EMBL:ETX05793.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_scaffold_55_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13846..15843
DNA (1998bp) protein (666aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=GWA2_Rokubacteria_73_35_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=4534454 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_55_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15840..17465
DNA (1626bp) protein (542aa)
Putative N-methylhydantoinase B id=4534456 bin=GWF2_Methylomirabilis_70_14 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative N-methylhydantoinase B Tax=GWA2_Rokubacteria_73_35_curated
putative N-methylhydantoinase B
13_1_40cm_scaffold_55_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17462..18241
DNA (780bp) protein (260aa)
short-chain dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-ketoacyl-(Acyl-carrier-protein) reductase id=4975506 bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase
13_1_40cm_scaffold_55_15
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

18356..19117
DNA (762bp) protein (254aa)
Putative selenium-dependent hydroxylase accessory protein YqeC n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KNW1_9FIRM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
putative selenium-dependent hydroxylase accessory protein YqeC
13_1_40cm_scaffold_55_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19134..21419
DNA (2286bp) protein (762aa)
aldehyde oxidase (EC:1.17.1.4) Tax=GWA2_Rokubacteria_73_35_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Probable aldehyde oxidase and xanthine dehydrogenase family protein transmembrane id=4975508 bin=GWA2_Methylomirabilis_73_35 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_55_17
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21423..21878
DNA (456bp) protein (152aa)
Putative CARBON MONOXIDE DEHYDROGENASE SUBUNIT G, COG3427 n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R8T5_CUPTR
hcrG; 4-hydroxybenzoyl-CoA reductase subunit G Tax=RBG_13_Deltaproteobacteria_53_10_curated
carbon monoxide dehydrogenase subunit g
13_1_40cm_scaffold_55_18
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21875..22336
DNA (462bp) protein (154aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C2N0_DESTA
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:AFM23821.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales
13_1_40cm_scaffold_55_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22378..23208
DNA (831bp) protein (277aa)
carbon monoxide dehydrogenase, medium subunit; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Xanthine dehydrogenase, FAD binding subunit (EC:1.17.1.4)
4-hydroxybenzoyl-CoA reductase FAD-binding subunit B n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S2N7_9BURK
13_1_40cm_scaffold_55_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(23228..24961)
DNA (1734bp) protein (578aa)
thiamine pyrophosphate binding domain-containing protein (EC:4.1.1.7) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036A20E3
putative thiamine pyrophosphate-requiring enzyme
13_1_40cm_scaffold_55_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24981..25781)
DNA (801bp) protein (267aa)
hpd; 4-hydroxyphenylpyruvate dioxygenase; K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] Tax=GWA2_Rokubacteria_73_35_curated
putative 4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
UPI0002971993 related cluster id=1866141 bin=GWA2_Methylomirabilis_73_35 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_55_22
unknown

Not on your lists

comp(25787..26128)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_scaffold_55_23
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26193..26975)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036BA46E
Uncharacterized protein {ECO:0000313|EMBL:ETW93960.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_scaffold_55_24
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

27563..27715
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F851_9PROT
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_scaffold_55_25
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27724..29559
DNA (1836bp) protein (612aa)
carbamoyl transferase; K00612 carbamoyltransferase [EC:2.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Predicted carbamoyl transferase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WBD6_MAGSA
carbamoyl transferase
13_1_40cm_scaffold_55_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(29592..30605)
DNA (1014bp) protein (338aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Methionine synthase (B12-independent) id=1866156 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
vitamin-B12 independent methionine synthase
13_1_40cm_scaffold_55_27
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(30605..31387)
DNA (783bp) protein (261aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein id=14627464 bin=bin7_NC10_sister species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=CSP1_6_Rokubacteria
ABC transporter
13_1_40cm_scaffold_55_28
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(31378..32187)
DNA (810bp) protein (270aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein id=14627465 bin=bin7_NC10_sister species=Desulfovibrio longus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=CSP1_6_Rokubacteria
branched-chain amino acid ABC transporter ATP-binding protein
13_1_40cm_scaffold_55_29
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(32184..33251)
DNA (1068bp) protein (356aa)
livM; inner-membrane translocator id=14627466 bin=bin7_NC10_sister species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
livM; inner-membrane translocator Tax=CSP1_6_Rokubacteria
ABC-type branched-chain amino acid transport system, permease component
13_1_40cm_scaffold_55_30
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(33264..34139)
DNA (876bp) protein (292aa)
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein id=14627467 bin=bin7_NC10_sister species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
inner-membrane translocator
Displaying items 1-30 of 46 in total

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