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13_1_40cm_scaffold_561

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_561_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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2..1342
DNA (1341bp) protein (447aa)
sun protein (fmu protein); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_46_16b_curated
tRNA and rRNA cytosine-C5-methylases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1B7_PELTS
Sun; tRNA and rRNA cytosine-C5-methylases
13_1_40cm_scaffold_561_2
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1733..2656)
DNA (924bp) protein (308aa)
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXA2_METFV
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01402}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01402};; Short=Phosphoglyceromutase {ECO:0000256|HA
13_1_40cm_scaffold_561_3
unknown

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2760..2969
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_scaffold_561_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

3276..5180
DNA (1905bp) protein (635aa)
DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RBG_16_Archaea_50_20_curated
DNA topoisomerase 1 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=TOP1_PYRHO
DNA topoisomerase I
13_1_40cm_scaffold_561_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(5096..5629)
DNA (534bp) protein (178aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_scaffold_561_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

5758..6483
DNA (726bp) protein (242aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RBG_13_Bathyarchaeota_38_9_curated
speB-1; agmatinase SpeB (EC:3.5.3.11)
Putative agmatinase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CX18_9ARCH
13_1_40cm_scaffold_561_7
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6480..7655
DNA (1176bp) protein (392aa)
Aminotransferase class I and II id=2009528 bin=GWB2_Proteobacteria_55_19 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Deltaproteobacteria_55_19_curated
hypothetical protein
13_1_40cm_scaffold_561_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(7869..8648)
DNA (780bp) protein (260aa)
DNA primase small subunit n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1T6_FERPA
DNA primase small subunit Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA primase small subunit
13_1_40cm_scaffold_561_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(8680..10464)
DNA (1785bp) protein (595aa)
DNA ligase I, ATP-dependent Dnl1 (EC:6.5.1.1)
DNA ligase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGC4_ACIB4
ATP-dependent DNA ligase I Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_scaffold_561_10
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(10504..11451)
DNA (948bp) protein (316aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9I0_9ARCH
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.
13_1_40cm_scaffold_561_11
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

11700..12338
DNA (639bp) protein (213aa)
type 11 methyltransferase Tax=CG_Levy_01
Methyltransferase type 11 id=4803517 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
type 11 methyltransferase
13_1_40cm_scaffold_561_12
unknown

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comp(12440..12682)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_scaffold_561_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

12982..13518
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003727633
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_scaffold_561_14
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13584..13967)
DNA (384bp) protein (128aa)
Metal dependent phosphohydrolase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWS1_9ARCH
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EGP93723.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Ni
metal dependent phosphohydrolase
13_1_40cm_scaffold_561_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

14625..14951
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D9Y0_STAHD
Marine sediment metagenome DNA, contig: S06H3_L03387 Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_scaffold_561_16
unknown

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15782..16390
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_40cm_scaffold_561_17
unknown

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16841..16981
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_scaffold_561_18
unknown

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17727..18221
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_scaffold_561_19
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18298..18897
DNA (600bp) protein (200aa)
Rhomboid family protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YF59_PARAH
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:AGT10088.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminoph
13_1_40cm_scaffold_561_20
unknown

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19414..21204
DNA (1791bp) protein (597aa)

This feature has no annotations

13_1_40cm_scaffold_561_trna_1
unknown

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comp(21605..21743)
DNA (139bp)
transferRNA
13_1_40cm_scaffold_561_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

22342..23274
DNA (933bp) protein (311aa)
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated
tfb1; transcription initiation factor IIB
13_1_40cm_scaffold_561_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

24018..24263
DNA (246bp) protein (82aa)
Protein translation factor SUI1 homolog n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3C4_9ARCH
translation initiation factor aSUI1 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor SUI1
13_1_40cm_scaffold_561_23
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(24487..25590)
DNA (1104bp) protein (368aa)
Glycosyl transferase, group 1 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DN36_STAMF
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABN70046.1}; TaxID=399550 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylotherm
13_1_40cm_scaffold_561_24
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(25631..26590)
DNA (960bp) protein (320aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Pacearch_01
NAD-dependent epimerase/dehydratase n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JM77_9THEM
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_561_25
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(26587..27294)
DNA (708bp) protein (236aa)
Nucleotidyl transferase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MDH4_CALMQ
nucleotidyl transferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
nucleotidyl transferase
13_1_40cm_scaffold_561_26
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(27450..28367)
DNA (918bp) protein (306aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVW9_ROSS1
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABQ90772.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Ros
13_1_40cm_scaffold_561_27
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28407..29162)
DNA (756bp) protein (252aa)
glycosyltransferase (EC:2.4.1.-)
Putative hydrolase n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QJK7_ARTGO
Putative hydrolase {ECO:0000313|EMBL:GAB13008.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
13_1_40cm_scaffold_561_28
unknown

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comp(29181..29582)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_scaffold_561_29
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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30168..30431
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RX12_THEPD
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
Displaying items 1-30 of 42 in total

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