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13_1_40cm_scaffold_563

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_563_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..732
DNA (732bp) protein (244aa)
putative L-aspartate dehydrogenase; K06989 aspartate dehydrogenase [EC:1.4.1.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Probable L-aspartate dehydrogenase id=4115298 bin=GWA2_Methylomirabilis_73_35 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative L-aspartate dehydrogenase
13_1_40cm_scaffold_563_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(833..1684)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003631046
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:EXG80076.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source=
putative ABC transporter, permease
13_1_40cm_scaffold_563_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1684..2586)
DNA (903bp) protein (301aa)
Putative ABC transport system permease protein n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6VPV4_9MICO
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:EXG80075.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source=
binding-protein-dependent transporters inner membrane component
13_1_40cm_scaffold_563_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2589..3833)
DNA (1245bp) protein (415aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6ULN7_9MICO
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:EXG80074.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; C
family 1 extracellular solute-binding protein
13_1_40cm_scaffold_563_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(3984..4403)
DNA (420bp) protein (140aa)
putative ferredoxin-thioredoxin reductase, catalytic subunit (EC:1.18.-.-)
Putative Ferredoxin-thioredoxin reductase, catalytic subunit {ECO:0000313|EMBL:CBK43249.1}; EC=1.18.-.- {ECO:0000313|EMBL:CBK43249.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitr
Putative Ferredoxin-thioredoxin reductase, catalytic subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ12_9BACT
13_1_40cm_scaffold_563_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4417..4596)
DNA (180bp) protein (60aa)
Glutaredoxin n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJW4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETW94666.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_scaffold_563_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4723..5652)
DNA (930bp) protein (310aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWA2_Rokubacteria_73_35_curated
Thioredoxin reductase id=4115297 bin=GWA2_Methylomirabilis_73_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thioredoxin reductase
13_1_40cm_scaffold_563_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5773..6456)
DNA (684bp) protein (228aa)
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HAD superfamily (Subfamily IA) hydrolase, TIGR02254 id=4115296 bin=GWA2_Methylomirabilis_73_35 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HAD-superfamily hydrolase
13_1_40cm_scaffold_563_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6519..6920)
DNA (402bp) protein (134aa)
Putative uncharacterized protein id=4115295 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_563_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6913..7656)
DNA (744bp) protein (248aa)
Putative uncharacterized protein id=4115294 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K00782 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_563_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7653..9020)
DNA (1368bp) protein (456aa)
(4Fe-4S) cluster-containing protein id=4115293 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iron-sulfur cluster binding protein Tax=GWA2_Rokubacteria_73_35_curated
iron-sulfur cluster binding protein
13_1_40cm_scaffold_563_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9068..9802)
DNA (735bp) protein (245aa)
Putative uncharacterized protein id=4115292 bin=GWA2_Methylomirabilis_73_35 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_563_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(9799..10122)
DNA (324bp) protein (108aa)
Cupin domain protein id=4143459 bin=GWF2_Methylomirabilis_70_14 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cupin domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
cupin domain-containing protein
13_1_40cm_scaffold_563_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10106..11356)
DNA (1251bp) protein (417aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4115290 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_563_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11356..12675)
DNA (1320bp) protein (440aa)
FAD linked oxidase-like protein id=4115289 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FAD linked oxidase-like protein Tax=GWA2_Rokubacteria_73_35_curated
FAD linked oxidase-like protein
13_1_40cm_scaffold_563_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12683..14128)
DNA (1446bp) protein (482aa)
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15)
Glycolate oxidase, subunit GlcD id=4115288 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_563_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14154..15041)
DNA (888bp) protein (296aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=GWA2_Rokubacteria_73_35_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta id=4115287 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine pyrophosphate domain-containing TPP-binding protein
13_1_40cm_scaffold_563_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(15118..16989)
DNA (1872bp) protein (624aa)
2-oxoacid:acceptor oxidoreductase subunit alpha (EC:1.2.7.3); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=GWA2_Rokubacteria_73_35_curated
2-oxoacid:acceptor oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha id=4115286 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_563_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(17193..17729)
DNA (537bp) protein (179aa)
Hypothetical conserved protein id=4115285 bin=GWA2_Methylomirabilis_73_35 species=uncultured alpha proteobacterium genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CBS domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_563_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(17753..18709)
DNA (957bp) protein (319aa)
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
LysR substrate-binding protein id=4115284 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator
13_1_40cm_scaffold_563_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

18820..20487
DNA (1668bp) protein (556aa)
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13) id=14626458 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Displaying 21 items

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