ggKbase home page

13_1_40cm_scaffold_636

Search features with annotation key words

Displaying items 1-30 of 69 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_636_1
unknown

Not on your lists

comp(1..699)
DNA (699bp) protein (233aa)

This feature has no annotations

13_1_40cm_scaffold_636_2
unknown

Not on your lists

758..1012
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_scaffold_636_3
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

1262..1927
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CF62_9BACT
idi5; isopentenyl-diphosphate delta-isomerase Idi5 Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
13_1_40cm_scaffold_636_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1973..2587)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF48_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AFU57433.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
13_1_40cm_scaffold_636_5
unknown

Not on your lists

2878..3516
DNA (639bp) protein (213aa)

This feature has no annotations

13_1_40cm_scaffold_636_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3850..4320
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4G5_METSW
Putative ester cyclase {ECO:0000313|EMBL:KCZ70593.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" s
hypothetical protein
13_1_40cm_scaffold_636_7
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4402..4917)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1F4_SPHTD
hypothetical protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
hypothetical protein
13_1_40cm_scaffold_636_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4930..5352)
DNA (423bp) protein (141aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00035DF16C
hypothetical protein
13_1_40cm_scaffold_636_9
unknown

Not on your lists

comp(5410..5565)
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_scaffold_636_10
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

5771..6193
DNA (423bp) protein (141aa)
yqjT; glyoxalase Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
Glyoxalase id=2306555 bin=GWA2_Methylomirabilis_73_35 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_636_11
unknown

Not on your lists

7124..7534
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_scaffold_636_12
unknown

Not on your lists

8392..8790
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_scaffold_636_13
unknown

Not on your lists

9137..9295
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_scaffold_636_14
unknown

Not on your lists

comp(9529..9873)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_scaffold_636_15
unknown

Not on your lists

comp(10023..10748)
DNA (726bp) protein (242aa)

This feature has no annotations

13_1_40cm_scaffold_636_16
unknown

Not on your lists

comp(11053..11778)
DNA (726bp) protein (242aa)

This feature has no annotations

13_1_40cm_scaffold_636_17
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12033..12356
DNA (324bp) protein (108aa)
Cell entry (Mce) related family protein {ECO:0000313|EMBL:CKH73938.1}; EC=1.-.-.- {ECO:0000313|EMBL:CKH73938.1};; TaxID=1772 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Myc
hypothetical protein n=1 Tax=Rhodococcus RepID=UPI00036B5055
cell entry protein
13_1_40cm_scaffold_636_18
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12420..13538
DNA (1119bp) protein (373aa)
Putative oxidoreductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NZ04_9DELT
Putative oxidoreductase {ECO:0000313|EMBL:EPX56086.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
oxidoreductase , NAD-binding Rossmann fold family protein
13_1_40cm_scaffold_636_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13757..14722)
DNA (966bp) protein (322aa)
diphosphomevalonate decarboxylase; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] Tax=RBG_16_Archaea_50_20_curated
mvaD; diphosphomevalonate decarboxylase (EC:4.1.1.33)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003814E9E
13_1_40cm_scaffold_636_20
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14729..15766)
DNA (1038bp) protein (346aa)
GldA; glycerol dehydrogenase; K00096 glycerol-1-phosphate dehydrogenase [NAD(P)] [EC:1.1.1.261] Tax=RBG_16_Bathyarchaeota_48_13_curated
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=G1PDH_METKA
GldA; glycerol dehydrogenase
13_1_40cm_scaffold_636_21
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15801..17513)
DNA (1713bp) protein (571aa)
DUF2070 family protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LHP3_HALWC
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
DUF2070 family protein
13_1_40cm_scaffold_636_22
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17517..18260)
DNA (744bp) protein (248aa)
geranylgeranylglyceryl phosphate synthase-like protein; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=RBG_16_Bathyarchaeota_57_9_curated
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00035E3920
geranylgeranylglyceryl phosphate synthase-like protein
13_1_40cm_scaffold_636_23
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(18273..19436)
DNA (1164bp) protein (388aa)
Geranylgeranyl reductase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RY40_THEPD
geranylgeranyl reductase
Geranylgeranyl reductase {ECO:0000313|EMBL:ABL78120.1}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain
13_1_40cm_scaffold_636_24
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(19446..20171)
DNA (726bp) protein (242aa)
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_scaffold_636_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20389..20628)
DNA (240bp) protein (80aa)
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MX71_PYRCJ
TRAM domain-containing protein Tax=RBG_16_Archaea_50_20_curated
putative RNA-binding protein, contains TRAM domain
13_1_40cm_scaffold_636_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

20830..21621
DNA (792bp) protein (264aa)
F420-0:gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
F420-0:gamma-glutamyl ligase (EC:6.3.2.-)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI0003763DF3
13_1_40cm_scaffold_636_27
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

21705..22895
DNA (1191bp) protein (397aa)
Metalloendopeptidase, M50 family, containing pdz domain n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9V239_PYRAB
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
serine protease htra related protein
13_1_40cm_scaffold_636_28
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

22873..23853
DNA (981bp) protein (327aa)
Predicted ATPase (PP-loop superfamily) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W864_UNCMA
n-type ATP pyrophosphatase superfamily protein Tax=RBG_16_Archaea_50_20_curated
ATPase
13_1_40cm_scaffold_636_29
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

23900..24436
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Aeromonas media WS RepID=K2I8D5_AERME
hypothetical protein Tax=RBG_16_Zixibacteria_48_11_curated
hypothetical protein
13_1_40cm_scaffold_636_30
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

24539..25126
DNA (588bp) protein (196aa)
psmB2; proteasome subunit beta (EC:3.4.25.1) Tax=RBG_16_Bathyarchaeota_48_13_curated
proteasome beta subunit (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8N0_9ARCH
Displaying items 1-30 of 69 in total

View Taxonomy