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13_1_40cm_scaffold_6713

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6713_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..617)
DNA (615bp) protein (205aa)
ABC transporter related id=4547695 bin=GWF2_Methylomirabilis_70_14 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein Tax=GWA2_Rokubacteria_70_23_curated
amino acid ABC transporter ATP-binding protein
13_1_40cm_scaffold_6713_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(610..1359)
DNA (750bp) protein (250aa)
ABC transporter permease protein id=3033655 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
13_1_40cm_scaffold_6713_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1356..2291)
DNA (936bp) protein (312aa)
amino acid ABC transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type transporter, integral membrane subunit id=4827658 bin=GWA2_Methylomirabilis_73_35 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter
13_1_40cm_scaffold_6713_4
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2288..3142)
DNA (855bp) protein (285aa)
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RBG_16_Deltaproteobacteria_48_10_curated
Amino acid/amide ABC transporter membrane protein 1, HAAT family id=2654094 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid/amide ABC transporter membrane protein 1, HAAT family
13_1_40cm_scaffold_6713_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3159..4142)
DNA (984bp) protein (328aa)
Luciferase-like monooxygenase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L3I1_HALJP
Luciferase-like monooxygenase {ECO:0000313|EMBL:EMA26989.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica D
luciferase-like monooxygenase
13_1_40cm_scaffold_6713_6
unknown

Not on your lists

4240..4404
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_scaffold_6713_7
unknown

Not on your lists

4846..5076
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_scaffold_6713_8
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5284..6516)
DNA (1233bp) protein (411aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1X8_DESTA
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AFM23569.1}; Flags: Precursor;; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntropho
13_1_40cm_scaffold_6713_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7034..7513
DNA (480bp) protein (160aa)
hypothetical protein
Putative uncharacterized protein id=1718108 bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
13_1_40cm_scaffold_6713_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(7685..8869)
DNA (1185bp) protein (395aa)
yqjV-like MFS-type transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Uncharacterized protein id=1735155 bin=GWD2_Deltaproteobacteria_55_8 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
yqjV-like MFS-type transporter
13_1_40cm_scaffold_6713_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9118..10296
DNA (1179bp) protein (393aa)
iron-containing alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
1,3-propanediol dehydrogenase id=3821886 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase C class IV
13_1_40cm_scaffold_6713_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10544..11830)
DNA (1287bp) protein (429aa)
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Amidohydrolase id=1757965 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidohydrolase
13_1_40cm_scaffold_6713_13
unknown

Not on your lists

comp(11815..11943)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_scaffold_6713_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12168..12566
DNA (399bp) protein (133aa)
Putative uncharacterized protein id=4319705 bin=GWA2_Methylomirabilis_73_35 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_6713_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12671..13216)
DNA (546bp) protein (182aa)
Peptidoglycan-associated lipoprotein id=2546000 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
OmpA/MotB protein; K03640 peptidoglycan-associated lipoprotein Tax=GWA2_Rokubacteria_73_35_curated
pal; peptidoglycan-associated lipoprotein
13_1_40cm_scaffold_6713_16
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13441..13737)
DNA (297bp) protein (99aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales;
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1J8_9PROT
hypothetical protein
13_1_40cm_scaffold_6713_17
unknown

Not on your lists

comp(13738..13974)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_scaffold_6713_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14057..14992
DNA (936bp) protein (312aa)
oxidoreductase, aryl-alcohol dehydrogenase like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldo/keto reductase id=3139747 bin=GWF2_Methylomirabilis_70_14 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
13_1_40cm_scaffold_6713_19
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15001..15903
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3J9W7_NITOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI19185.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C
13_1_40cm_scaffold_6713_20
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16198..16815
DNA (618bp) protein (206aa)
putative periplasmic-binding protein; K02044 phosphonate transport system substrate-binding protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Putative uncharacterized protein id=1314843 bin=GWE1_T_denit_62_9 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter substrate-binding protein
13_1_40cm_scaffold_6713_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16760..16960
DNA (201bp) protein (67aa)
phosphate/phosphonate ABC transporter periplasmic protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
13_1_40cm_scaffold_6713_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16960..20016
DNA (3057bp) protein (1019aa)
PAS domain S-box n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRH4_SINAD
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:AHG93420.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_6713_23
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20052..21179)
DNA (1128bp) protein (376aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae
Pyruvate carboxylase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4Z9_9RHOO
pyruvate carboxylase
13_1_40cm_scaffold_6713_24
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21176..22507)
DNA (1332bp) protein (444aa)
Pyruvate carboxylase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q6C1_9RHOO
pyruvate carboxylase Tax=RBG_16_Betaproteobacteria_64_18_curated
pyruvate carboxylase
Displaying 24 items

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