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13_1_40cm_scaffold_774

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_774_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..1428
DNA (1428bp) protein (476aa)
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional regulator id=14625658 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Mg chelatase subunit ChlI
13_1_40cm_scaffold_774_2
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1453..1707)
DNA (255bp) protein (85aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP49214.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
id=14431409 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
13_1_40cm_scaffold_774_3
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1729..2319)
DNA (591bp) protein (197aa)
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein id=14431410 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
13_1_40cm_scaffold_774_4
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2360..3130
DNA (771bp) protein (257aa)
Alpha/beta hydrolase fold protein n=2 Tax=Rhodospirillum rubrum RepID=G2T9L7_RHORU
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABC21363.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospiril
13_1_40cm_scaffold_774_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3255..3932)
DNA (678bp) protein (226aa)
Lytic transglycosylase, catalytic Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lytic transglycosylase, catalytic id=3544309 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Lytic transglycosylase, catalytic
13_1_40cm_scaffold_774_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4012..5796)
DNA (1785bp) protein (595aa)
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53) id=14625663 bin=bin7_NC10_sister species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin7_NC10_sister organism_group=NC10
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53)
13_1_40cm_scaffold_774_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6387..6776)
DNA (390bp) protein (130aa)
Transcriptional regulator id=3544313 bin=GWA2_Methylomirabilis_73_35 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR Tax=GWA2_Rokubacteria_73_35_curated
transcriptional regulator
13_1_40cm_scaffold_774_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6773..6964)
DNA (192bp) protein (64aa)
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
DnaJ-class molecular chaperone with C-terminal Zn finger domain id=3544317 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_774_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6928..7590)
DNA (663bp) protein (221aa)
Zn finger domain-containing DnaJ-class molecular chaperone; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DnaJ-class molecular chaperone with C-terminal Zn finger domain id=3544317 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DnaJ family protein
13_1_40cm_scaffold_774_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7598..9517)
DNA (1920bp) protein (640aa)
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) id=14625666 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70)
13_1_40cm_scaffold_774_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9694..10083)
DNA (390bp) protein (130aa)
Heat shock protein Hsp20 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Heat shock protein Hsp20 id=4311462 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Heat shock protein Hsp20
13_1_40cm_scaffold_774_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10267..10917
DNA (651bp) protein (217aa)
hypothetical protein id=4311463 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_774_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10898..11284)
DNA (387bp) protein (129aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4311464 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_774_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

11347..12156
DNA (810bp) protein (270aa)
protein mazG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Protein mazG id=4311465 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein mazG
13_1_40cm_scaffold_774_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12153..12689
DNA (537bp) protein (179aa)
Predicted phosphatase id=4311466 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphatase Tax=GWA2_Rokubacteria_73_35_curated
phosphatase
13_1_40cm_scaffold_774_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12699..14438
DNA (1740bp) protein (580aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type IV-A pilus assembly ATPase PilB id=3773045 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type II secretion system protein E
13_1_40cm_scaffold_774_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14468..15586
DNA (1119bp) protein (373aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Twitching motility pilus retraction ATPase id=4686860 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
twitching motility protein
13_1_40cm_scaffold_774_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15601..16803
DNA (1203bp) protein (401aa)
pilC; type 4 fimbrial assembly protein pilC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type 4 fimbrial assembly protein pilC id=4686861 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pilC; type 4 fimbrial assembly protein pilC
13_1_40cm_scaffold_774_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16803..18416
DNA (1614bp) protein (538aa)
multi-sensor signal transduction histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Multi-sensor signal transduction histidine kinase id=14625675 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Multi-sensor signal transduction histidine kinase
13_1_40cm_scaffold_774_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18409..19794
DNA (1386bp) protein (462aa)
pilR; transcriptional regulatory protein pilR; K02667 two-component system, NtrC family, response regulator PilR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pilR; regulator protein pilR; K02667 two-component system, NtrC family, response regulator PilR id=14625676 bin=bin7_NC10_sister species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pilR; transcriptional regulatory protein pilR
13_1_40cm_scaffold_774_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21658..23583
DNA (1926bp) protein (642aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tetratricopeptide TPR_2 repeat protein id=4953734 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_774_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

23628..24374
DNA (747bp) protein (249aa)
prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=GWA2_Rokubacteria_73_35_curated
Type 4 prepilin-like proteins leader peptide-processing enzyme id=4383531 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pilD; type IV prepilin-like proteins leader peptide processing enzyme
13_1_40cm_scaffold_774_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24371..24820
DNA (450bp) protein (150aa)
Putative type 4 fimbrial pilin related transmembrane protein id=4953736 bin=GWA2_Methylomirabilis_73_35 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative type 4 fimbrial pilin related transmembrane protein Tax=GWA2_Rokubacteria_73_35_curated
pilin assembly protein
13_1_40cm_scaffold_774_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

24817..25251
DNA (435bp) protein (145aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4953737 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_774_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25262..26611
DNA (1350bp) protein (450aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4139422 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_774_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

26886..27935
DNA (1050bp) protein (350aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=GWA2_Rokubacteria_73_35_curated
Type IV pilus assembly protein PilM id=4953742 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pilM; type IV pilus biogenesis protein PilM
13_1_40cm_scaffold_774_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

27932..28498
DNA (567bp) protein (189aa)
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Type IV pilus assembly protein PilN id=4614264 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fimbrial assembly family protein
13_1_40cm_scaffold_774_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

28500..29096
DNA (597bp) protein (199aa)
pilO; protein PilO; K02664 type IV pilus assembly protein PilO Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14625683 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pilO; protein PilO
13_1_40cm_scaffold_774_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

29108..29557
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4614259 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_774_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

29558..31738
DNA (2181bp) protein (727aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4614258 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Displaying items 1-30 of 41 in total

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