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13_1_40cm_scaffold_8184

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_8184_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..1961)
DNA (1959bp) protein (653aa)
Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AU50_CHLCH
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein of unknown function DUF2723
13_1_40cm_scaffold_8184_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1982..3301)
DNA (1320bp) protein (440aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3K8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90525.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical membrane protein
13_1_40cm_scaffold_8184_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3378..4067)
DNA (690bp) protein (230aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7V9_GEMAT
Protein of unknown function DUF2723
Uncharacterized protein {ECO:0000313|EMBL:AHG90525.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_8184_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4252..5574)
DNA (1323bp) protein (441aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.
Bifunctional purine biosynthesis protein PurH n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPT9_ROSS1
Bifunctional purine biosynthesis protein purH
13_1_40cm_scaffold_8184_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5568..6638)
DNA (1071bp) protein (357aa)
Peptidase family protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEB7_TERRK
peptidase M42 family protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase family protein
13_1_40cm_scaffold_8184_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(6635..7513)
DNA (879bp) protein (293aa)
Peptidase family protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEB7_TERRK
Putative M42 glutamyl aminopeptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase family protein
13_1_40cm_scaffold_8184_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7503..8141)
DNA (639bp) protein (213aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphoribosylglycinamide formyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJU7_RHOM4
phosphoribosylglycinamide formyltransferase
13_1_40cm_scaffold_8184_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8153..8584)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI000366AC81
gluconolactonase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase S1 and S6 chymotrypsin/Hap
13_1_40cm_scaffold_8184_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8607..9173)
DNA (567bp) protein (189aa)
gmhB; D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6I7_HERA2
histidinol-phosphate phosphatase family protein
13_1_40cm_scaffold_8184_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9166..10521)
DNA (1356bp) protein (452aa)
selenocysteine synthase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I009_CALAS
selenocysteine synthase
13_1_40cm_scaffold_8184_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10518..11768)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_8184_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11711..12499)
DNA (789bp) protein (263aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Valine--tRNA ligase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TC05_HELMI
Suspect SCG annotation. See neighboring gene [13_1_40cm_scaffold_8184_13].
Valyl-tRNA synthetase
13_1_40cm_scaffold_8184_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(12465..14342)
DNA (1878bp) protein (626aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Valine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W5_GEMAT
Valyl-tRNA synthetase
13_1_40cm_scaffold_8184_14
unknown

Not on your lists

14482..14640
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_scaffold_8184_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(15518..16375)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6Y9_9ACTN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_40cm_scaffold_8184_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16720..17802
DNA (1083bp) protein (361aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acetyl-CoA acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X1_GEMAT
acetyl-CoA acetyltransferase
13_1_40cm_scaffold_8184_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17802..18293
DNA (492bp) protein (164aa)
BioY protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NR36_MARHT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
BioY protein
13_1_40cm_scaffold_8184_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18316..19164
DNA (849bp) protein (283aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG94_RHOM4
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
13_1_40cm_scaffold_8184_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19148..20293
DNA (1146bp) protein (382aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X4_GEMAT
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_scaffold_8184_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20232..21350
DNA (1119bp) protein (373aa)
leucine dehydrogenase (EC:1.4.1.9); K00263 leucine dehydrogenase [EC:1.4.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Leucine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X5_GEMAT
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_scaffold_8184_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21302..21739
DNA (438bp) protein (146aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:BAH38336.1}; EC=5.3.1.6 {ECO:0000313|EMBL:BAH38336.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
ribose 5-phosphate isomerase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B49713
13_1_40cm_scaffold_8184_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21736..23022
DNA (1287bp) protein (429aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=GLYA_ANASK
13_1_40cm_scaffold_8184_23
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

23012..23476
DNA (465bp) protein (155aa)
heat shock protein Hsp20 family protein Tax=RBG_13_Chloroflexi_66_10_curated
Heat shock protein id=1817188 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
heat shock protein Hsp20
13_1_40cm_scaffold_8184_24
unknown

Not on your lists

comp(24026..24343)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_scaffold_8184_25

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24645..25520
DNA (876bp) protein (292aa)
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
hypothetical protein, partial n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI00036A4E7A
Marine sediment metagenome DNA, contig: S01H1_L04138 {ECO:0000313|EMBL:GAF81295.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_scaffold_8184_26
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25460..25735
DNA (276bp) protein (92aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5STC0_9GAMM
13_1_40cm_scaffold_8184_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25732..26118
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Verrucomicrobia/Planctomycetes-restricted protein
Displaying 27 items

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