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13_1_40cm_scaffold_866

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_866_1
unknown

Not on your lists

comp(32..463)
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_40cm_scaffold_866_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(541..2763)
DNA (2223bp) protein (741aa)
Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UA81_METS4
putative phytochrome sensor protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative phytochrome sensor protein
13_1_40cm_scaffold_866_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2889..4160
DNA (1272bp) protein (424aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
ABC-type branched-chain amino acid transport systems, periplasmic component id=4923977 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
twin-arginine translocation pathway signal protein
13_1_40cm_scaffold_866_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4527..5015
DNA (489bp) protein (163aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Inner-membrane translocator id=4923979 bin=GWC2_Methylomirabilis_70_16 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
inner-membrane translocator
13_1_40cm_scaffold_866_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5012..5842
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PTK8_9BRAD
inner-membrane translocator
Uncharacterized protein {ECO:0000313|EMBL:EKS41693.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
13_1_40cm_scaffold_866_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5839..7224
DNA (1386bp) protein (462aa)
ABC transporter related protein id=4923983 bin=GWC2_Methylomirabilis_70_16 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter ATP-binding protein I
13_1_40cm_scaffold_866_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

7224..8252
DNA (1029bp) protein (343aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=14626695 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=CSP1_6_Rokubacteria
methionine synthase, vitamin-B12 independent
13_1_40cm_scaffold_866_8
Pseudomonas sp. 5, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8249..8962)
DNA (714bp) protein (238aa)
Class II Aldolase/Adducin Family Protein n=1 Tax=Pseudomonas sp. UW4 RepID=K9NGT4_9PSED
Aldolase {ECO:0000313|EMBL:KJK05884.1}; TaxID=1619949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 5.;"
Class II Aldolase/Adducin Family Protein
13_1_40cm_scaffold_866_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9142..9342
DNA (201bp) protein (67aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626330 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_866_10
unknown

Not on your lists

comp(9364..9576)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_866_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9634..10203)
DNA (570bp) protein (190aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_866_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10395..11585
DNA (1191bp) protein (397aa)
Formyl-CoA transferase (EC:2.8.3.16) Tax=GWA2_Rokubacteria_73_35_curated
Formyl-CoA transferase id=1924176 bin=GWA2_Methylomirabilis_73_35 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein C7orf10
13_1_40cm_scaffold_866_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11659..12447
DNA (789bp) protein (263aa)
fadB; enoyl CoA hydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Enoyl CoA hydratase id=1924174 bin=GWA2_Methylomirabilis_73_35 species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fadB; enoyl CoA hydratase
13_1_40cm_scaffold_866_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12450..13616
DNA (1167bp) protein (389aa)
mmgC1; acyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl-CoA dehydrogenase id=1924172 bin=GWA2_Methylomirabilis_73_35 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mmgC1; acyl-CoA dehydrogenase
13_1_40cm_scaffold_866_15
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13638..14255)
DNA (618bp) protein (206aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
13_1_40cm_scaffold_866_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14385..15341
DNA (957bp) protein (319aa)
mvaB; hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] Tax=GWA2_Rokubacteria_73_35_curated
mvaB; hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
Putative hydroxymethylglutaryl-CoA lyase id=3674961 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_866_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15341..15904
DNA (564bp) protein (188aa)
Putative O-methyltransferase id=1924162 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
O-methyltransferase family protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_866_18
unknown

Not on your lists

comp(15905..17083)
DNA (1179bp) protein (393aa)

This feature has no annotations

13_1_40cm_scaffold_866_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17143..18093
DNA (951bp) protein (317aa)
Luciferase family protein id=1924160 bin=GWA2_Methylomirabilis_73_35 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase family protein Tax=GWA2_Rokubacteria_73_35_curated
luciferase family protein
13_1_40cm_scaffold_866_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18141..18785
DNA (645bp) protein (215aa)
lipolytic protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lipolytic enzyme, G-D-S-L id=1924158 bin=GWA2_Methylomirabilis_73_35 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adventurous gliding motility protein C
13_1_40cm_scaffold_866_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18775..19083
DNA (309bp) protein (103aa)
Conserved uncharacterized protein id=1924154 bin=GWA2_Methylomirabilis_73_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_866_22
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19122..19709
DNA (588bp) protein (196aa)
Integral membrane protein TerC n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WIU8_ACTMD
NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97557.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
integral membrane protein TerC
Displaying 22 items

View Taxonomy