ggKbase home page

13_1_40cm_scaffold_9132

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_9132_1
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..478)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037927A8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB30136.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (
13_1_40cm_scaffold_9132_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(503..1498)
DNA (996bp) protein (332aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RBG_13_Acidobacteria_68_16_curated
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
DNA-formamidopyrimidine glycosylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGG1_ANASK
13_1_40cm_scaffold_9132_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1572..3386
DNA (1815bp) protein (605aa)
GAF sensor signal transduction histidine kinase (EC:2.7.13.3)
GAF sensor signal transduction histidine kinase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UMJ6_ANASK
integral membrane sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_9132_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3403..3864
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GIX9_SORC5
response regulator receiver domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_9132_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3861..4112)
DNA (252bp) protein (84aa)
phosphoribosylformylglycinamidine synthase PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Phosphoribosylformylglycinamidine synthase, purS n=2 Tax=Sulfobacillus acidophilus RepID=G8TXD4_SULAD
phosphoribosylformylglycinamidine synthase PurS
13_1_40cm_scaffold_9132_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4109..4993)
DNA (885bp) protein (295aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3B0_SPHTD
13_1_40cm_scaffold_9132_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5043..6371)
DNA (1329bp) protein (443aa)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
adenylosuccinate lyase (EC:4.3.2.2)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5240832 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_scaffold_9132_8
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(6349..6870)
DNA (522bp) protein (174aa)
ClpC ATPase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L031_THERP
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RBG_16_Chloroflexi_64_32_curated
ClpC ATPase
13_1_40cm_scaffold_9132_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6870..7346)
DNA (477bp) protein (159aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Laceyella sacchari RepID=UPI0003B2F04C
phosphoribosylcarboxyaminoimidazole mutase
13_1_40cm_scaffold_9132_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7343..8716)
DNA (1374bp) protein (458aa)
purD; phosphoribosylamine-glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Phosphoribosylamine--glycine ligase id=4074889 bin=GWC2_Chloroflexi_73_18 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
phosphoribosylamine--glycine ligase
13_1_40cm_scaffold_9132_11
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8713..9192)
DNA (480bp) protein (160aa)
Nitrate/nitrite transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H594_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII51464.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
13_1_40cm_scaffold_9132_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9202..9468
DNA (267bp) protein (89aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_9132_13
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9522..9779
DNA (258bp) protein (86aa)
transcriptional modulator of MazE/toxin MazF; K07171 mRNA interferase [EC:3.1.-.-] Tax=RifOxyA12_full_Proteobacteria_58_15_curated
mRNA interferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SL21_9BACT
13_1_40cm_scaffold_9132_14
unknown

Not on your lists

comp(9803..10018)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_scaffold_9132_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10009..10683)
DNA (675bp) protein (225aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B3X8_HERA2
guaA; GMP synthase
13_1_40cm_scaffold_9132_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10680..11441)
DNA (762bp) protein (254aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GMP synthase [glutamine-hydrolyzing] id=3311523 bin=GWC2_Chloroflexi_73_18 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
guaA; GMP synthase
13_1_40cm_scaffold_9132_17
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(11548..12927)
DNA (1380bp) protein (460aa)
peptidase U62 family protein Tax=RBG_16_Chloroflexi_68_14_curated
Peptidase U62 family protein id=4684399 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
peptidase U62 family protein
13_1_40cm_scaffold_9132_18
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(12924..13118)
DNA (195bp) protein (65aa)
TldD/PmbA family protein; K03568 TldD protein Tax=RBG_16_Chloroflexi_58_14_curated
peptidase U62 modulator of DNA gyrase; K03568 TldD protein id=7200597 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
C69 family peptidase
13_1_40cm_scaffold_9132_19
unknown

Not on your lists

13556..14578
DNA (1023bp) protein (341aa)

This feature has no annotations

13_1_40cm_scaffold_9132_20
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(14385..15884)
DNA (1500bp) protein (500aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2N4_THERP
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
13_1_40cm_scaffold_9132_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15927..16949)
DNA (1023bp) protein (341aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14629589 bin=bin8_Chloro species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_scaffold_9132_22
unknown

Not on your lists

comp(17029..17361)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_scaffold_9132_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(17423..18163)
DNA (741bp) protein (247aa)
Uncharacterized MFS-type transporter yusP n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGE2_9CHLR
putative drug transport protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
EmrB/QacA subfamily drug resistance transporter
Displaying 23 items

View Taxonomy