ggKbase home page

13_1_40cm_scaffold_9187

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_9187_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2..706
DNA (705bp) protein (235aa)
integral membrane protein MviN; K03980 virulence factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Integral membrane protein MviN id=2720726 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane protein MviN
13_1_40cm_scaffold_9187_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

800..1684
DNA (885bp) protein (295aa)
XerD; site-specific recombinase XerD; K04763 integrase/recombinase XerD id=14625766 bin=bin7_NC10_sister species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
XerD; site-specific recombinase XerD; K04763 integrase/recombinase XerD Tax=CSP1_6_Rokubacteria
tyrosine recombinase XerD
13_1_40cm_scaffold_9187_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

1681..3330
DNA (1650bp) protein (550aa)
hypothetical protein; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] id=14625765 bin=bin7_NC10_sister species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=CSP1_6_Rokubacteria
Polynucleotide adenylyltransferase region
13_1_40cm_scaffold_9187_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3332..4933
DNA (1602bp) protein (534aa)
pyrG; CTP synthase (CTP synthetase) (EC:6.3.4.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pyrG; CTP synthase (CTP synthetase) (EC:6.3.4.2) id=14625764 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pyrG; CTP synthase (CTP synthetase) (EC:6.3.4.2)
13_1_40cm_scaffold_9187_5
unknown

Not on your lists

comp(4862..5200)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_scaffold_9187_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5528..5812
DNA (285bp) protein (95aa)
kdsA; 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase id=4411426 bin=GWC2_Methylomirabilis_70_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_9187_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5809..6168
DNA (360bp) protein (120aa)
kpsF; arabinose 5-phosphate isomerase (EC:5.3.1.13) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
kpsF; arabinose 5-phosphate isomerase (EC:5.3.1.13)
Arabinose 5-phosphate isomerase id=3879936 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 7 items

View Taxonomy