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13_1_40cm_scaffold_1078

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1078_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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21..1421
DNA (1401bp) protein (467aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT21_KORVE
amino acid transporter
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABF39979.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.
13_1_40cm_scaffold_1078_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1795..2013
DNA (219bp) protein (73aa)
Transcriptional regulator, MerR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT22_KORVE
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABF39978.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_1_40cm_scaffold_1078_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2195..2917)
DNA (723bp) protein (241aa)
Oxidoreductase FAD/NAD(P)-binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT05_KORVE
oxidoreductase FAD/NAD(P)-binding protein
Oxidoreductase FAD/NAD(P)-binding protein {ECO:0000313|EMBL:ABF39995.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_40cm_scaffold_1078_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3160..5034)
DNA (1875bp) protein (625aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT00_KORVE
glutamine--fructose-6-phosphate transaminase
13_1_40cm_scaffold_1078_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5172..5417)
DNA (246bp) protein (82aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
Phosphoribosylformylglycinamidine synthetase PurS n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISZ9_KORVE
phosphoribosylformylglycinamidine synthase subunit PurS
13_1_40cm_scaffold_1078_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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6002..8065
DNA (2064bp) protein (688aa)
Sigma-54 dependent transcriptional regulator (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIU6_9BACT
Sigma-54 dependent transcriptional regulator (Modular protein) {ECO:0000313|EMBL:CBK43183.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidat
Fis family transcriptional regulator
13_1_40cm_scaffold_1078_7
unknown

Not on your lists

8043..8249
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_scaffold_1078_8
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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8281..9042
DNA (762bp) protein (254aa)
GTP-binding protein Obg/CgtA; K03979 GTP-binding protein Tax=RBG_16_RIF_CHLX_70_13_curated
GTPase obg id=4832812 bin=GWC2_Chloroflexi_73_18 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
GTP-binding protein Obg/CgtA
13_1_40cm_scaffold_1078_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9023..9328
DNA (306bp) protein (102aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKZ4_KORVE
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABF42456.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_40cm_scaffold_1078_10
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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9719..10177
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=3438866 bin=GWC2_Ignavibacteria_38_9 species=Haloferax mucosum genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
hypothetical protein
13_1_40cm_scaffold_1078_11
unknown

Not on your lists

comp(9990..10520)
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_scaffold_1078_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10567..11808)
DNA (1242bp) protein (414aa)
Phosphoesterase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR81_KORVE
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:ABF40619.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
13_1_40cm_scaffold_1078_13
unknown

Not on your lists

comp(11831..12010)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_scaffold_1078_14
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12355..13251)
DNA (897bp) protein (299aa)
dTDP-4-dehydrorhamnose reductase n=2 Tax=Geobacter sulfurreducens RepID=D7AMI3_GEOSK
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KIE41736.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter
rmlD; dTDP-4-dehydrorhamnose reductase
13_1_40cm_scaffold_1078_15
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13265..13807)
DNA (543bp) protein (181aa)
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=5 Tax=Crocosphaera watsonii RepID=T2IGM8_CROWT
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:GAO34665.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulf
13_1_40cm_scaffold_1078_16
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13836..14744)
DNA (909bp) protein (303aa)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AK17_9PROT
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:GAO34664.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source=
glucose-1-phosphate thymidylyltransferase
13_1_40cm_scaffold_1078_17
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14793..15857)
DNA (1065bp) protein (355aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Thiobacillus thioparus RepID=UPI0003602592
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:GAO34663.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella
13_1_40cm_scaffold_1078_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(16055..18496)
DNA (2442bp) protein (814aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K683_9FIRM id=5223571 bin=16ft_combo_ws3_JS1 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
group 1 glycosyl transferase Tax=RBG_16_RIF_WS3X_71_46_curated
group 1 glycosyl transferase
13_1_40cm_scaffold_1078_19
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(18468..19718)
DNA (1251bp) protein (417aa)
Glycosyl transferase group 1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNM0_ROSCS
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ABU59161.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexu
13_1_40cm_scaffold_1078_20
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19737..20966)
DNA (1230bp) protein (410aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KL59_9FIRM
membrane protein involved in the export of O-antigen and teichoic acid
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:AGL03933.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococ
Displaying 20 items

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