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13_1_40cm_scaffold_11408

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_11408_1
unknown

Not on your lists

comp(1..150)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_scaffold_11408_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(162..743)
DNA (582bp) protein (194aa)
alkA; DNA-3-methyladenine glycosylase (EC:3.2.2.21); K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
alkA; DNA-3-methyladenine glycosylase (EC:3.2.2.21)
DNA-3-methyladenine glycosylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9D0_9BACT
13_1_40cm_scaffold_11408_3
unknown

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comp(855..1067)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_11408_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1174..1557)
DNA (384bp) protein (128aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_11408_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1711..2262)
DNA (552bp) protein (184aa)
Amidohydrolase 3 n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UUP2_MYCVA
D-aminoacylase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
N-acyl-D-aspartate/D-glutamate deacylase
13_1_40cm_scaffold_11408_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2288..2470)
DNA (183bp) protein (61aa)
N-acyl-D-aspartate/D-glutamate deacylase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q100_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETW96406.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidohydrolase 3
13_1_40cm_scaffold_11408_7
unknown

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2701..3066
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_scaffold_11408_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3154..3675
DNA (522bp) protein (174aa)
universal stress protein UspA-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UspA domain protein id=2534889 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
UspA domain-containing protein
13_1_40cm_scaffold_11408_9
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(3706..4083)
DNA (378bp) protein (126aa)
Predicted membrane protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYS1_9BACT
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CCW35153.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas
13_1_40cm_scaffold_11408_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4094..4459)
DNA (366bp) protein (122aa)
Predicted permeases Tax=CSP1_2_Dadabacteria
Predicted permeases id=14425234 bin=bin1_lowGC species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_40cm_scaffold_11408_11
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4516..4857)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U9N5_9CYAN
hypothetical protein
Permease {ECO:0000313|EMBL:KGF73986.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
13_1_40cm_scaffold_11408_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5123..5359
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_11408_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5403..6083
DNA (681bp) protein (227aa)
Heavy metal response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA26_9BACT
cztR; heavy metal response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cztR; heavy metal response regulator
13_1_40cm_scaffold_11408_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6083..7480
DNA (1398bp) protein (466aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJT7_SYNFM
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
integral membrane sensor signal transduction histidine kinase
13_1_40cm_scaffold_11408_15
unknown

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7486..7680
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_scaffold_11408_16
unknown

Not on your lists

comp(7697..7858)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_scaffold_11408_17
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7875..8129)
DNA (255bp) protein (85aa)
peroxiredoxin n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035DA1BD
Peroxiredoxin {ECO:0000313|EMBL:KIF83778.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;
ahpC/TSA family protein
13_1_40cm_scaffold_11408_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8449..8895
DNA (447bp) protein (149aa)
Putative uncharacterized protein id=1904680 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. WH 5701 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_11408_19
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8991..9350
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KDB53621.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans D
RES domain protein id=1904677 bin=GWA2_Methylomirabilis_73_35 species=Chamaesiphon minutus genus=Chamaesiphon taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RES domain-containing protein
13_1_40cm_scaffold_11408_20
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(9591..11876)
DNA (2286bp) protein (762aa)
MMPL domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHF8_THET1
MMPL domain protein
MMPL domain protein {ECO:0000313|EMBL:ACZ43179.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_scaffold_11408_21
unknown

Not on your lists

comp(11873..12127)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_scaffold_11408_22
unknown

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12142..12894
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_40cm_scaffold_11408_23
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12723..14372)
DNA (1650bp) protein (550aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=GWC2_Rokubacteria_70_16_curated
Xanthine dehydrogenase, molybdenum binding subunit apoprotein id=3162221 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oxidoreductase, large chain
13_1_40cm_scaffold_11408_24
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(15242..16771)
DNA (1530bp) protein (510aa)
UbiD-type (de) carboxylyase-like protein id=14626327 bin=bin7_NC10_sister species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
UbiD-type (de) carboxylyase-like protein Tax=CSP1_6_Rokubacteria
UbiD-type (de) carboxylyase-like protein
13_1_40cm_scaffold_11408_25
unknown

Not on your lists

comp(16812..17111)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_scaffold_11408_26
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17168..17680)
DNA (513bp) protein (171aa)
enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase [EC:4.2.1.17] id=14626521 bin=bin7_NC10_sister species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein {ECO:0000313|EMBL:ETX05786.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_scaffold_11408_27
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(17700..18128)
DNA (429bp) protein (143aa)
CoA-binding domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CI56_DESK7
putative acetyl-CoA synthetase; K09181 hypothetical protein Tax=CG_Anaero_02
CoA-binding domain-containing protein
13_1_40cm_scaffold_11408_28
unknown

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18355..19050
DNA (696bp) protein (232aa)

This feature has no annotations

Displaying 28 items

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