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13_1_40cm_scaffold_17535

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_17535_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(69..581)
DNA (513bp) protein (171aa)
30S ribosomal protein S5 id=2042508 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=GWD2_Deltaproteobacteria_55_8_curated
rpsE; 30S ribosomal protein S5
13_1_40cm_scaffold_17535_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(595..966)
DNA (372bp) protein (124aa)
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
50S ribosomal protein L18 id=4261435 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
50S ribosomal protein L18
13_1_40cm_scaffold_17535_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1121..1429)
DNA (309bp) protein (103aa)
50S ribosomal protein L6 n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=RL6_ACAM1
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
rplF; 50S ribosomal protein L6
13_1_40cm_scaffold_17535_4
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1454..1849)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Gracilimonas tropica RepID=UPI000368A612
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_13_Deltaproteobacteria_60_28_curated
30S ribosomal protein S8
13_1_40cm_scaffold_17535_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1859..2044)
DNA (186bp) protein (62aa)
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=GWD2_Deltaproteobacteria_55_8_curated
30S ribosomal protein S14 type Z id=4857429 bin=GWC2_Deltaproteobacteria_56_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
rpsN; 30S ribosomal protein S14
13_1_40cm_scaffold_17535_6
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2050..2589)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=3 Tax=Anaeromyxobacter RepID=RL5_ANAD2
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=CG_Desulfob_01
rplE; 50S ribosomal protein L5
13_1_40cm_scaffold_17535_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2591..2911)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 id=2042516 bin=GWD2_Deltaproteobacteria_55_8 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=GWD2_Deltaproteobacteria_55_8_curated
50S ribosomal protein L24
13_1_40cm_scaffold_17535_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2921..3289)
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
50S ribosomal protein L14 id=2042517 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L14
13_1_40cm_scaffold_17535_9
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3301..3558)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=3 Tax=Caldicellulosiruptor RepID=E4Q824_CALH1
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter
13_1_40cm_scaffold_17535_10
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists


comp(3561..3767)
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDQ7_9FIRM
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_16_NC10_65_8_curated
50S ribosomal protein L29
13_1_40cm_scaffold_17535_11
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists


comp(3757..4182)
DNA (426bp) protein (142aa)
50S ribosomal protein L16 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XVX1_9BACT
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RBG_13_Caldithrix_44_9_curated
rplP; 50S ribosomal protein L16
13_1_40cm_scaffold_17535_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4194..4856)
DNA (663bp) protein (221aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
30S ribosomal protein S3 id=4261414 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
30S ribosomal protein S3
13_1_40cm_scaffold_17535_13
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4858..5208)
DNA (351bp) protein (117aa)
50S ribosomal protein L22 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RE99_DESPD
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; De
13_1_40cm_scaffold_17535_14
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(5220..5516)
DNA (297bp) protein (99aa)
30S ribosomal protein S19 n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SUM9_9DELT
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1609970 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Candidatus Magnetoovum chiem
rpsS; 30S ribosomal protein S19
13_1_40cm_scaffold_17535_15
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5523..6341)
DNA (819bp) protein (273aa)
50S ribosomal protein L2 n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=RL2_GEOLS
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
rplB; 50S ribosomal protein L2
13_1_40cm_scaffold_17535_16
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6345..6566)
DNA (222bp) protein (74aa)
50S ribosomal protein L23 n=4 Tax=Selenomonas RepID=D4S5K7_9FIRM
ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23 Tax=RBG_13_Deltaproteobacteria_47_9_curated
Ribosomal protein L25/L23
13_1_40cm_scaffold_17535_17
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6563..7201)
DNA (639bp) protein (213aa)
50S ribosomal protein L4 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQL2_9FIRM
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
50S ribosomal protein L4
13_1_40cm_scaffold_17535_18
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7213..7815)
DNA (603bp) protein (201aa)
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
50S ribosomal protein L3 id=1841443 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L3
Displaying 18 items

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