ggKbase home page

13_1_40cm_scaffold_42174

Search features with annotation key words

Displaying 8 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_42174_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..306
DNA (306bp) protein (102aa)
kdpD; Osmosensitive K+ channel histidine kinase KdpD; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
osmosensitive K+ channel signal transduction histidine kinase id=2137624 bin=GWD2_Deltaproteobacteria_55_8 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
integral membrane sensor signal transduction histidine kinase
13_1_40cm_scaffold_42174_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

303..998
DNA (696bp) protein (232aa)
Two component transcriptional regulator, winged helix family id=2137629 bin=GWD2_Deltaproteobacteria_55_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
two component transcriptional regulator, winged helix family; K07667 two-component system, OmpR family, KDP operon response regulator KdpE Tax=GWD2_Deltaproteobacteria_55_8_curated
winged helix family two component transcriptional regulator
13_1_40cm_scaffold_42174_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1273..2526
DNA (1254bp) protein (418aa)
DNA polymerase III subunits gamma/tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
DNA polymerase III, subunits gamma and tau n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LM15_SYNFM
DNA polymerase III subunits gamma and tau
13_1_40cm_scaffold_42174_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2555..2896
DNA (342bp) protein (114aa)
DNA polymerase III subunits gamma/tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
13_1_40cm_scaffold_42174_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2964..3290
DNA (327bp) protein (109aa)
DNA-binding protein, YbaB/EbfC family Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Nucleoid-associated protein SYNAS_00790 id=4113775 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_40cm_scaffold_42174_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3360..3980
DNA (621bp) protein (207aa)
Recombination protein RecR n=2 Tax=Geobacillus RepID=RECR_GEOTN
recombination protein RecR; K06187 recombination protein RecR Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
recR; recombination protein RecR
13_1_40cm_scaffold_42174_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3990..4283
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W5N8_DESIS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
hypothetical protein
13_1_40cm_scaffold_42174_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4611..4826
DNA (216bp) protein (72aa)
arabinose efflux permease family protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
arabinose efflux permease family protein id=14429985 bin=bin3_NC10 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
major facilitator superfamily protein
Displaying 8 items

View Taxonomy