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13_1_40cm_scaffold_929

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_929_1

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162..569
DNA (408bp) protein (136aa)
30S ribosomal protein S6e n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=RS6E_NITMS
30S ribosomal protein S6e
Uncharacterized protein {ECO:0000313|EMBL:KKM27410.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_scaffold_929_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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600..1865
DNA (1266bp) protein (422aa)
translation initiation factor IF-2 id=14428620 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
translation initiation factor IF-2 Tax=CSP1_1_Thaumarchaeota
translation initiation factor IF-2
13_1_40cm_scaffold_929_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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1858..2040
DNA (183bp) protein (61aa)
hypothetical protein id=14428619 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_929_4
RBG_16_Archaea_50_20_curated, Archaea

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2259..2915
DNA (657bp) protein (219aa)
Zn-dependent hydrolase of the beta-lactamase fold protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHY2_NITGG
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
Zn-dependent hydrolase
13_1_40cm_scaffold_929_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3003..5711
DNA (2709bp) protein (903aa)
uncharacterized membrane protein required for N-linked glycosylation; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] Tax=CSP1_1_Thaumarchaeota
uncharacterized membrane protein required for N-linked glycosylation; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] id=14428617 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
dolichyl-diphosphooligosaccharide--protein glycotransferase (EC:2.4.1.119)
13_1_40cm_scaffold_929_6
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5875..6675)
DNA (801bp) protein (267aa)
RNA binding S1 domain protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXM5_9ARCH
RNA binding S1 domain protein {ECO:0000313|EMBL:EGP92806.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitro
S1 RNA binding domain protein
13_1_40cm_scaffold_929_7

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comp(6714..7286)
DNA (573bp) protein (191aa)
Cob(I)alamin adenosyltransferase (CobO, btuR) {ECO:0000313|EMBL:AIF25192.1}; EC=2.5.1.17 {ECO:0000313|EMBL:AIF25192.1};; TaxID=1456414 species="Archaea; Thaumarchaeota; environmental samples.;" source
Cob(I)alamin adenosyltransferase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B1T1_9ARCH
cob(I)alamin adenosyltransferase
13_1_40cm_scaffold_929_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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7365..8606
DNA (1242bp) protein (414aa)
geranylgeranyl reductase id=14427668 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
geranylgeranyl reductase Tax=CSP1_1_Thaumarchaeota
Geranylgeranyl reductase
13_1_40cm_scaffold_929_9

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8646..10001
DNA (1356bp) protein (452aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=150229
Probable cobyrinic acid A,C-diamide synthase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3D7_9ARCH
cobB; Cobyrinic acid A,C-diamide synthase
13_1_40cm_scaffold_929_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9990..10628)
DNA (639bp) protein (213aa)
cobH; precorrin-8X methylmutase (EC:5.4.99.61)
precorrin-8X methylmutase CbiC/CobH id=14428612 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
precorrin-8X methylmutase CbiC/CobH Tax=CSP1_1_Thaumarchaeota
13_1_40cm_scaffold_929_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10625..11371)
DNA (747bp) protein (249aa)
cobalamin (vitamin B12) biosynthesis CbiX protein id=14428611 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cobalamin (vitamin B12) biosynthesis CbiX protein Tax=CSP1_1_Thaumarchaeota
Cobalamin (Vitamin B12) biosynthesis CbiX protein
13_1_40cm_scaffold_929_12

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comp(11368..12432)
DNA (1065bp) protein (355aa)
Cobalamin (Vitamin B12) biosynthesis CbiG protein (CbiG) {ECO:0000313|EMBL:AIF17888.1}; EC=3.7.1.12 {ECO:0000313|EMBL:AIF17888.1};; TaxID=1456296 species="Archaea; Thaumarchaeota; environmental sample
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003749395
cobalamin (vitamin B12) biosynthesis protein CbiG
13_1_40cm_scaffold_929_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(12464..13561)
DNA (1098bp) protein (366aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=140
cbiD; putative cobalt-precorrin-6A synthase (EC:2.1.1.-)
Putative cobalt-precorrin-6A synthase (Deacetylating) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVJ0_9ARCH
13_1_40cm_scaffold_929_14
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(13600..14085)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVD2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06532.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
DnaJ domain protein
13_1_40cm_scaffold_929_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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14099..14962
DNA (864bp) protein (288aa)
NAD-dependent epimerase/dehydratase id=14428608 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
NAD-dependent epimerase/dehydratase Tax=CSP1_1_Thaumarchaeota
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_929_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(14939..16114)
DNA (1176bp) protein (392aa)
Methionine adenosyltransferase 1 (AdoMet synthetase) {ECO:0000313|EMBL:CDI06530.1}; EC=2.5.1.6 {ECO:0000313|EMBL:CDI06530.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeo
Methionine adenosyltransferase 1 (AdoMet synthetase) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV90_9ARCH
methionine adenosyltransferase
13_1_40cm_scaffold_929_17

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comp(16114..16413)
DNA (300bp) protein (100aa)
Small nuclear ribonucleoprotein (RUXX) {ECO:0000313|EMBL:AIF24216.1}; TaxID=1456400 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_26_E12.;
like-Sm ribonucleoprotein core id=14428606 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
small nuclear ribonucleoprotein
13_1_40cm_scaffold_929_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16456..17106
DNA (651bp) protein (217aa)
recombinase A id=14428605 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
recombinase A Tax=CSP1_1_Thaumarchaeota
recombinase A
13_1_40cm_scaffold_929_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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17199..19958
DNA (2760bp) protein (920aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=CSP1_1_Thaumarchaeota
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=14428603 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DEAD/DEAH box helicase
13_1_40cm_scaffold_929_20
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19955..21352)
DNA (1398bp) protein (466aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXN7_9ARCH
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:EGP92818.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source
Nucleic acid-binding domain protein
13_1_40cm_scaffold_929_21

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21427..22380
DNA (954bp) protein (318aa)
multidrug ABC transporter ATPase n=1 Tax=Nitrosopumilus sp. SJ RepID=UPI0003786145
Uncharacterized protein {ECO:0000313|EMBL:KKM64317.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter related
13_1_40cm_scaffold_929_22
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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22403..23113
DNA (711bp) protein (237aa)
ABC-2 type transporter n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVI6_9ARCH
ABC-2 type transporter {ECO:0000313|EMBL:CDI06523.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ABC-2 family transporter protein
13_1_40cm_scaffold_929_23
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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23844..29102
DNA (5259bp) protein (1753aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEM8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFS83492.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
hypothetical protein
13_1_40cm_scaffold_929_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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29314..29622
DNA (309bp) protein (103aa)
hypothetical protein id=14427597 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_929_25
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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29623..30048
DNA (426bp) protein (142aa)
Cytochrome c oxidase subunit II n=3 Tax=Candidatus Nitrosoarchaeum RepID=F3KLD9_9ARCH
cupredoxin-like domain protein
Cupredoxin-like domain protein {ECO:0000313|EMBL:AJA92250.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
13_1_40cm_scaffold_929_26
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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30107..31651
DNA (1545bp) protein (515aa)
heme/copper-type cytochrome/quinol oxidase, subunit 1 (EC:1.9.3.1)
Cytochrome c oxidase subunit I n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYU7_9ARCH
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:EGP92915.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitr
13_1_40cm_scaffold_929_27
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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31653..32630
DNA (978bp) protein (326aa)
Blue (Type 1) copper domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV58_9ARCH
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:CDI06439.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Blue (Type1) copper domain-containing protein
13_1_40cm_scaffold_929_28
uncultured marine crenarchaeote HF4000_ANIW133M9, Nitrosopumilales, Thaumarchaeota, Archaea

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32633..33079
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW133M9 RepID=B3T482_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ07391.1}; TaxID=455573 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000
cytochrome oxidase assembly domain protein
13_1_40cm_scaffold_929_29

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33665..34261
DNA (597bp) protein (199aa)
hypothetical protein id=14427591 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Polyketide cyclase / dehydrase {ECO:0000313|EMBL:KFM15056.1}; TaxID=1502294 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC
hypothetical protein
13_1_40cm_scaffold_929_trna_1
unknown

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34317..34405
DNA (89bp)
transferRNA
Displaying items 1-30 of 39 in total

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