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13_1_40cm_scaffold_1190

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1190_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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1..1275
DNA (1275bp) protein (425aa)
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=14427557 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=CSP1_1_Thaumarchaeota
phosphoglucosamine mutase (EC:5.4.2.10)
13_1_40cm_scaffold_1190_2

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1327..1722
DNA (396bp) protein (132aa)
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=1502290 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Mari
rpl7ae; 50S ribosomal protein L7Ae id=14427556 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rpl7ae; 50S ribosomal protein L7Ae
13_1_40cm_scaffold_1190_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1719..1925
DNA (207bp) protein (69aa)
30S ribosomal protein S28e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IIL4_NITGG
rps28e; 30S ribosomal protein S28e
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrosos
13_1_40cm_scaffold_1190_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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2138..2539
DNA (402bp) protein (134aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
ndk; nucleoside pyrophosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQX5_9ARCH
13_1_40cm_scaffold_1190_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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2546..4327
DNA (1782bp) protein (594aa)
Putative translation initiation factor IF-2A n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR70_9ARCH
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
infB; putative translation initiation factor IF-2
13_1_40cm_scaffold_1190_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4324..4677)
DNA (354bp) protein (118aa)
Putative thioredoxin n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEH7_NITGG
trxA3; thioredoxin
Putative thioredoxin {ECO:0000313|EMBL:AFU59746.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gar
13_1_40cm_scaffold_1190_7
uncultured marine crenarchaeote HF4000_APKG3H9, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4745..5137)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=3 Tax=environmental samples RepID=B3T460_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ08599.1}; TaxID=455586 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000
archease protein family
13_1_40cm_scaffold_1190_8

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5261..6532
DNA (1272bp) protein (424aa)
Histidyl-tRNA synthetase (HARS, hisS) {ECO:0000313|EMBL:AIF07840.1}; EC=6.1.1.21 {ECO:0000313|EMBL:AIF07840.1};; TaxID=1456103 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncult
hisS; histidine--tRNA ligase (EC:6.1.1.21)
Putative tRNA synthetase class II core domain (G, H, P, S and T) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARH7_9ARCH
13_1_40cm_scaffold_1190_9

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comp(6516..7187)
DNA (672bp) protein (224aa)
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1456097 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncu
translation initiation factor; K03264 translation initiation factor 6 id=14427536 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
translation initiation factor
13_1_40cm_scaffold_1190_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7265..7717
DNA (453bp) protein (151aa)
Putative 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKJ0_NITGG
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Putative 4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:AFU59517.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nit
13_1_40cm_scaffold_1190_11
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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7759..8292
DNA (534bp) protein (178aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR83_9ARCH
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDI05127.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
4Fe-4S ferredoxin
13_1_40cm_scaffold_1190_trna_1
unknown

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8410..8493
DNA (84bp)
transferRNA
13_1_40cm_scaffold_1190_12
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(8497..9450)
DNA (954bp) protein (318aa)
Replication factor C small subunit n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARU2_9ARCH
Replication factor C small subunit {ECO:0000313|EMBL:CDI05128.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
replication factor C
13_1_40cm_scaffold_1190_13

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9652..10167
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL09925.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=14427533 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
GINS complex protein
13_1_40cm_scaffold_1190_14

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10164..11372
DNA (1209bp) protein (403aa)
MCM family protein n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KKY9_9ARCH
Replicative DNA helicase (Mcm, cdc21) {ECO:0000313|EMBL:AIF08997.1}; TaxID=1456128 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_34_B07.;"
MCM family protein
13_1_40cm_scaffold_1190_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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11369..12205
DNA (837bp) protein (279aa)
Putative MCM family protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARI2_9ARCH
Putative MCM family protein {ECO:0000313|EMBL:CDI05130.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
MCM family protein
13_1_40cm_scaffold_1190_16
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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12202..14328
DNA (2127bp) protein (709aa)
putative ski2-type helicase (EC:3.6.4.-)
ATP-dependent DNA helicase Hel308 {ECO:0000256|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00442};; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae
DEAD/DEAH box helicase; K03726 helicase [EC:3.6.4.-] id=14427531 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_scaffold_1190_17
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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14325..15320
DNA (996bp) protein (332aa)
Glycosyl transferase family protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B7C0_9ARCH
glycosyl transferase
Glycosyl transferase family protein {ECO:0000313|EMBL:AFS82038.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumi
13_1_40cm_scaffold_1190_18
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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15317..15550
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3T5_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS80129.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_scaffold_1190_19
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(15547..16023)
DNA (477bp) protein (159aa)
Putative bacterial transferase hexapeptide (Three repeats) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARF3_9ARCH
Putative bacterial transferase hexapeptide (Three repeats) {ECO:0000313|EMBL:CDI05134.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon
Acetyltransferase
13_1_40cm_scaffold_1190_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16030..16299)
DNA (270bp) protein (90aa)
Uncharacterized protein family UPF0434/Trm112 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICD1_NITGG
hypothetical protein
UPF0434 protein Ngar_c21050 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitroso
13_1_40cm_scaffold_1190_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16296..16925)
DNA (630bp) protein (210aa)
oxidoreductase domain-containing protein id=14427526 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
oxidoreductase domain-containing protein Tax=CSP1_1_Thaumarchaeota
oxidoreductase domain-containing protein
Displaying 22 items

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