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13_1_40cm_scaffold_14903

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_14903_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2..562
DNA (561bp) protein (187aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Cysteine desulfurase id=4206292 bin=GWF2_Methylomirabilis_70_14 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysteine desulfurase NifS
13_1_40cm_scaffold_14903_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

559..939
DNA (381bp) protein (127aa)
FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
nifU; FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins id=14625373 bin=bin7_NC10_sister species=Oscillibacter sp. 1-3 genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Iron-sulfur cluster assembly scaffold protein
13_1_40cm_scaffold_14903_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

932..1594
DNA (663bp) protein (221aa)
cysE; serine acetyltransferase (EC:2.3.1.30) Tax=GWA2_Rokubacteria_73_35_curated
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase id=4848469 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_14903_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1591..1770
DNA (180bp) protein (60aa)
Excisionase/Xis, DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Excisionase/Xis, DNA-binding protein id=4848467 bin=GWA2_Methylomirabilis_73_35 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_14903_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1767..2330
DNA (564bp) protein (188aa)
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Metal dependent phosphohydrolase id=4848465 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metal dependent phosphohydrolase
13_1_40cm_scaffold_14903_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2377..3528
DNA (1152bp) protein (384aa)
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) id=14625377 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7)
13_1_40cm_scaffold_14903_7
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3579..4538
DNA (960bp) protein (320aa)
UPI0003CF656F related cluster n=1 Tax=unknown RepID=UPI0003CF656F
Uncharacterized protein {ECO:0000313|EMBL:ESX79996.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
taurine catabolism dioxygenase
13_1_40cm_scaffold_14903_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4628..6298
DNA (1671bp) protein (557aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4848419 bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_14903_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6513..6965
DNA (453bp) protein (151aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=GWA2_Rokubacteria_73_35_curated
Carbamoyl-phosphate synthase L chain ATP-binding protein id=4748227 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Carbamoyl-phosphate synthase L chain ATP-binding protein
13_1_40cm_scaffold_14903_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6958..7173
DNA (216bp) protein (72aa)
biotin/lipoic acid binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Biotin/lipoyl attachment domain-containing protein id=4748228 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
biotin/lipoyl attachment domain-containing protein
13_1_40cm_scaffold_14903_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

7184..7378
DNA (195bp) protein (65aa)
DinB family protein id=14625385 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
DinB family protein Tax=CSP1_6_Rokubacteria
Displaying 11 items

View Taxonomy
NameRatio
Rokubacteria
90.91%
Proteobacteria
9.09%
Rokubacteria: 0.9090909090909091Proteobacteria: 0.09090909090909091RokubacteriaProteobacteria