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13_1_40cm_scaffold_18104

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_18104_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..345)
DNA (345bp) protein (115aa)
Branched-chain amino acid transport system permease protein id=1703885 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livH; branched-chain amino acid transport system permease protein; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
branched-chain amino acid ABC transporter
13_1_40cm_scaffold_18104_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(413..1699)
DNA (1287bp) protein (429aa)
ABC-type branched-chain amino acid transport systems; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC-type branched-chain amino acid transport systems id=2644242 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type branched-chain amino acid transport systems
13_1_40cm_scaffold_18104_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1775..2923)
DNA (1149bp) protein (383aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1) Tax=GWA2_Rokubacteria_73_35_curated
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase id=1703889 bin=GWA2_Methylomirabilis_73_35 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_18104_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2935..4110)
DNA (1176bp) protein (392aa)
putative acyl-CoA transferase/carnitine dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
CoA-transferase family III protein id=1703890 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative acyl-CoA transferase/carnitine dehydratase
13_1_40cm_scaffold_18104_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4107..5378)
DNA (1272bp) protein (424aa)
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase id=1703891 bin=GWA2_Methylomirabilis_73_35 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_18104_6
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5401..6126)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B57045
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC43139.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_scaffold_18104_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6139..6894)
DNA (756bp) protein (252aa)
LivF; ABC-type branched-chain amino acid transport systems, ATPase component; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
High-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F) id=1703893 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LivF; ABC-type branched-chain amino acid transport systems, ATPase component
13_1_40cm_scaffold_18104_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6997..7758)
DNA (762bp) protein (254aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter related id=1703894 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
13_1_40cm_scaffold_18104_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7765..8928)
DNA (1164bp) protein (388aa)
putative branched chain amino acid ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Putative branched chain amino acid ABC transporter substrate-binding protein id=4254256 bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative branched chain amino acid ABC transporter substrate-binding protein
13_1_40cm_scaffold_18104_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8950..10110)
DNA (1161bp) protein (387aa)
putative branched chain amino acid ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative branched chain amino acid ABC transporter substrate-binding protein id=4849842 bin=GWC2_Methylomirabilis_70_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative branched chain amino acid ABC transporter substrate-binding protein
13_1_40cm_scaffold_18104_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10205..10471)
DNA (267bp) protein (89aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Inner-membrane translocator id=4849841 bin=GWC2_Methylomirabilis_70_16 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
inner-membrane translocator
13_1_40cm_scaffold_18104_12
unknown

Not on your lists

11518..11814
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_scaffold_18104_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11975..12235)
DNA (261bp) protein (87aa)
4-vinyl reductase 4VR id=1703903 bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-vinyl reductase 4VR Tax=GWA2_Rokubacteria_73_35_curated
Displaying 13 items

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