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13_1_40cm_scaffold_3402

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3402_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..267)
DNA (267bp) protein (89aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZF6_RUBXD
Enoyl-CoA hydratase/isomerase Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_3402_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

605..1399
DNA (795bp) protein (265aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sora
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZE6_SORCE
hypothetical protein
13_1_40cm_scaffold_3402_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1405..2481
DNA (1077bp) protein (359aa)
deoxyhypusine synthase; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase id=2432286 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_3402_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2509..2934
DNA (426bp) protein (142aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=5032665 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_3402_5
Pseudomonas mandelii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2935..3729)
DNA (795bp) protein (265aa)
anti-sigma factor n=1 Tax=Pseudomonas RepID=UPI0003825D47
Anti-sigma factor {ECO:0000313|EMBL:KDD65138.1}; TaxID=1419583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii PD
transmembrane transcriptional regulator
13_1_40cm_scaffold_3402_6
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3734..4279)
DNA (546bp) protein (182aa)
RNA polymerase sigma factor n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GDD3_PROFC
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium fre
rpoE; RNA polymerase sigma-70 factor, sigma-E factor
13_1_40cm_scaffold_3402_7
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4416..4748
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00038090F6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC22463.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.
13_1_40cm_scaffold_3402_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

4775..5692
DNA (918bp) protein (306aa)
Metallophosphoesterase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRM9_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:EEF57500.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedos
metallophosphoesterase
13_1_40cm_scaffold_3402_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5726..6688)
DNA (963bp) protein (321aa)
Patatin id=2688476 bin=GWF2_Methylomirabilis_70_14 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase superfamily esterase; K07001 NTE family protein Tax=GWA2_Rokubacteria_70_23_curated
patatin-like phospholipase
13_1_40cm_scaffold_3402_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(6738..7505)
DNA (768bp) protein (256aa)
rnb; exoribonuclease II (EC:3.1.13.1) Tax=RBG_13_Acidobacteria_68_16_curated
rnb; exoribonuclease II (EC:3.1.13.1)
Putative exoribonuclease II n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM25_9BACT
13_1_40cm_scaffold_3402_11
unknown

Not on your lists

comp(8176..8328)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_scaffold_3402_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8325..8555)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00036D3E19
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
N-acetyltransferase GCN5
13_1_40cm_scaffold_3402_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8552..8803)
DNA (252bp) protein (84aa)
GCN5-related N-acetyltransferase n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3MDS3_ANAVT
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
N-acetyltransferase GCN5
13_1_40cm_scaffold_3402_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8904..10286
DNA (1383bp) protein (461aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein sce8293 id=2306499 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_3402_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10309..11190
DNA (882bp) protein (294aa)
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid aminotransferase id=3949866 bin=GWC2_Methylomirabilis_70_16 species=Vibrio splendidus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched-chain amino acid aminotransferase
13_1_40cm_scaffold_3402_16
Emmonsia crescens, Emmonsia, Onygenales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

11187..11963
DNA (777bp) protein (259aa)
PREDICTED: uncharacterized protein LOC741359 n=1 Tax=Pan troglodytes RepID=UPI000292AD8D
Uncharacterized protein {ECO:0000313|EMBL:KKZ62169.1}; TaxID=1247875 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Emm
hypothetical protein
13_1_40cm_scaffold_3402_17
unknown

Not on your lists

11986..12615
DNA (630bp) protein (210aa)

This feature has no annotations

13_1_40cm_scaffold_3402_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12617..13459
DNA (843bp) protein (281aa)
2-keto-3-deoxy-D-arabinonate dehydratase (EC:4.2.1.-); K01726 [EC:4.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Fumarylacetoacetate (FAA) hydrolase id=3716441 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fumarylacetoacetate (FAA) hydrolase
Displaying 18 items

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