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13_1_40cm_scaffold_54629

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_54629_1
unknown

Not on your lists

3..89
DNA (87bp) protein (29aa)

This feature has no annotations

13_1_40cm_scaffold_54629_2
unknown

Not on your lists

155..388
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_scaffold_54629_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(719..1930)
DNA (1212bp) protein (404aa)
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] id=14625075 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=CSP1_6_Rokubacteria
L-threonine ammonia-lyase (EC:4.3.1.19)
13_1_40cm_scaffold_54629_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1991..2890)
DNA (900bp) protein (300aa)
asrgl; L-asparaginase (Asparaginase-like protein 1) (EC:3.5.1.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
asrgl; L-asparaginase (Asparaginase-like protein 1) (EC:3.5.1.1)
Peptidase T2 asparaginase 2 id=3500033 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_54629_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

4005..4496
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K1K3_STREN
putative serine protease MucD domain protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_scaffold_54629_6
GWA2_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4599..5060)
DNA (462bp) protein (154aa)
Tax=GWA2_Deltaproteobacteria_47_9_curated
13_1_40cm_scaffold_54629_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5478..5792
DNA (315bp) protein (105aa)
Putative Zn-dependent protease, involved in pqq synthesis (PpqF) id=3708847 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Zn-dependent protease Tax=GWA2_Rokubacteria_73_35_curated
Zn-dependent protease
13_1_40cm_scaffold_54629_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5792..6778
DNA (987bp) protein (329aa)
secretion protein HlyD family protein; K01993 HlyD family secretion protein Tax=GWA2_Rokubacteria_73_35_curated
Secretion protein HlyD family protein id=3708846 bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
secretion protein HlyD family protein
13_1_40cm_scaffold_54629_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6881..7891
DNA (1011bp) protein (337aa)
ABC transporter ATP-binding protein (EC:3.6.3.-) Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter ATP-binding protein (EC:3.6.3.-)
Putative ABC transporter (ATP-binding protein) id=3708845 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_54629_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7893..9017
DNA (1125bp) protein (375aa)
Putative ABC transporter (Permease proteine) id=3708844 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter permease
13_1_40cm_scaffold_54629_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9023..10318
DNA (1296bp) protein (432aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Peptidase M16 domain protein, involved in ppq synthesis (PpqG) id=3708843 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_54629_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10315..10890
DNA (576bp) protein (192aa)
id=14625060 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14625060 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_54629_13
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

11068..11571
DNA (504bp) protein (168aa)
hypothetical protein id=14625059 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
13_1_40cm_scaffold_54629_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11657..12523
DNA (867bp) protein (289aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4380018 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying 14 items

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