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13_1_40cm_scaffold_90682

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_90682_1
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..98
DNA (96bp) protein (32aa)
Elongation factor Tu n=1 Tax=uncultured bacterium RepID=K2A3B9_9BACT
translation elongation factor Tu; K02358 elongation factor Tu Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
13_1_40cm_scaffold_90682_trna_1
unknown

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393..466
DNA (74bp)
transferRNA
13_1_40cm_scaffold_90682_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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503..694
DNA (192bp) protein (64aa)
preprotein translocase, SecE subunit Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Preprotein translocase, SecE subunit id=3836410 bin=GWF2_Methylomirabilis_70_14 species=Ruminococcus albus genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
preprotein translocase subunit SecE
13_1_40cm_scaffold_90682_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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691..1248
DNA (558bp) protein (186aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nusG; component in transcription antitermination id=14627337 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NusG antitermination factor
13_1_40cm_scaffold_90682_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1277..1696
DNA (420bp) protein (140aa)
rplK; 50S ribosomal protein L11 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L11 id=3447240 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplK; 50S ribosomal protein L11
13_1_40cm_scaffold_90682_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1931..2473
DNA (543bp) protein (181aa)
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L1 id=3447243 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
50S ribosomal protein L1
13_1_40cm_scaffold_90682_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


3057..3353
DNA (297bp) protein (99aa)
50S ribosomal protein L7/L12 n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=RL7_PELTS
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rplL; 50S ribosomal protein L7/L12
13_1_40cm_scaffold_90682_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3428..3877
DNA (450bp) protein (150aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA-directed RNA polymerase subunit beta id=3447253 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rpoB; DNA-directed RNA polymerase subunit beta
Displaying 8 items

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