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13_1_40cm_scaffold_12198

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_12198_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..325
DNA (324bp) protein (108aa)
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Major facilitator superfamily MFS_1 id=3564806 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arabinose efflux permease family protein
13_1_40cm_scaffold_12198_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(486..2789)
DNA (2304bp) protein (768aa)
gspE2; general secretion pathway protein E Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
General secretion pathway protein E, contains GAF domain id=2045751 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
gspE2; general secretion pathway protein E
13_1_40cm_scaffold_12198_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2872..4272)
DNA (1401bp) protein (467aa)
ferredoxin-NADP reductase; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ferredoxin--NADP(+) reductase id=4040236 bin=GWA2_Methylomirabilis_73_35 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ferredoxin-NADP reductase
13_1_40cm_scaffold_12198_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4272..4718)
DNA (447bp) protein (149aa)
CBS domain containing protein id=4040235 bin=GWA2_Methylomirabilis_73_35 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_12198_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(4753..6435)
DNA (1683bp) protein (561aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase id=4257366 bin=GWF2_Methylomirabilis_70_14 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_12198_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(6428..6847)
DNA (420bp) protein (140aa)
LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE530
LAO/AO transport system ATPase
Displaying 6 items

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