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13_1_40cm_scaffold_3033

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3033_1
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

230..988
DNA (759bp) protein (253aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=RBG_13_Chloroflexi_54_9_curated
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB80_AMMDK
13_1_40cm_scaffold_3033_2
unknown

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1044..1586
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_40cm_scaffold_3033_3
Sulfurihydrogenibium yellowstonense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

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1596..2633
DNA (1038bp) protein (346aa)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FK60_9AQUI
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:M
aspartate-semialdehyde dehydrogenase
13_1_40cm_scaffold_3033_4
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2630..3541
DNA (912bp) protein (304aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=264732 species
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=DAPA_MOOTA
13_1_40cm_scaffold_3033_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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3657..4166
DNA (510bp) protein (170aa)
Phage DNA polymerase-related protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXL9_THERP
phage DNA polymerase-like protein
Phage DNA polymerase-related protein {ECO:0000313|EMBL:ACM04590.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseu
13_1_40cm_scaffold_3033_6
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

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4215..5873
DNA (1659bp) protein (553aa)
Beta-lactamase domain protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W4L9_DESAS
Ribonuclease J {ECO:0000313|EMBL:KJR96587.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
beta-lactamase domain-containing protein
13_1_40cm_scaffold_3033_7
unknown

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6059..6172
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_40cm_scaffold_3033_8
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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6201..7415
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IAF7_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM02245.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensi
13_1_40cm_scaffold_3033_9
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(7311..7607)
DNA (297bp) protein (99aa)
hypothetical protein id=17039841 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
13_1_40cm_scaffold_3033_10
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7749..9950
DNA (2202bp) protein (734aa)
DNA segregation ATPase, FtsK/SpoIIIE family n=2 Tax=Desulfitobacterium RepID=I4AAD5_DESDJ
DNA segregation ATPase FtsK
DNA segregation ATPase, FtsK/SpoIIIE family {ECO:0000313|EMBL:AFM00920.1}; Flags: Precursor;; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.
13_1_40cm_scaffold_3033_11
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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9976..11040
DNA (1065bp) protein (355aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N5C1_SLAHD
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:ACV22106.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slack
13_1_40cm_scaffold_3033_12
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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11155..12261
DNA (1107bp) protein (369aa)
Protein RecA n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CS09_CLOPF
recA; protein RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1209989 species="Bacteria; Firmicut
13_1_40cm_scaffold_3033_13
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12302..12739
DNA (438bp) protein (146aa)
Regulatory protein RecX n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDB8_GEOUR
regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysoba
13_1_40cm_scaffold_3033_14
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12857..14395
DNA (1539bp) protein (513aa)
metal dependent phosphohydrolase (EC:3.1.4.16)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=635013 species="Bacteria; Firmicutes; Clostridi
Ribonuclease Y n=1 Tax=Thermincola potens (strain JR) RepID=D5XES0_THEPJ
13_1_40cm_scaffold_3033_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14450..15241
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI000363681C
hypothetical protein; K09769 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_3033_16
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

15255..15536
DNA (282bp) protein (94aa)
SpoVS n=2 Tax=Dictyoglomus RepID=B5YDA7_DICT6
SpoVS
SpoVS {ECO:0000313|EMBL:ACI20125.1}; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6
13_1_40cm_scaffold_3033_17

Not on your lists

15587..16816
DNA (1230bp) protein (410aa)
RNA modification protein n=1 Tax=uncultured prokaryote RepID=H5SLF2_9ZZZZ
RNA modification protein {ECO:0000313|EMBL:BAL56988.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
13_1_40cm_scaffold_3033_18
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

16813..17868
DNA (1056bp) protein (352aa)
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS id=14632993 bin=bin9_gal15 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=CSP1_3_Armatimonadetes
mutS; DNA mismatch repair protein MutS
13_1_40cm_scaffold_3033_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

18000..19208
DNA (1209bp) protein (403aa)
DNA mismatch repair protein MutS n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1I9_SPHTD
DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae
13_1_40cm_scaffold_3033_20
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

19205..20854
DNA (1650bp) protein (550aa)
DNA mismatch repair protein MutL n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1X6_ROSS1
mutL; DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL Tax=RBG_13_Chloroflexi_66_10_curated
DNA mismatch repair protein MutL
13_1_40cm_scaffold_3033_21
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

20904..21239
DNA (336bp) protein (112aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] id=16960875 bin=RBG_16_Aminicenantes_66_30 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RBG_16_Aminicenantes_66_30_curated
miaA; tRNA dimethylallyltransferase (EC:2.5.1.75)
Displaying 21 items

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