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13_1_40cm_scaffold_7114

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_7114_1
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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86..694
DNA (609bp) protein (203aa)
Two component transcriptional regulator, LuxR family protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CG95_STRBB
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family protein {ECO:0000313|EMBL:ADI08999.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source=
13_1_40cm_scaffold_7114_2

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comp(714..1451)
DNA (738bp) protein (246aa)
Transcriptional repressor DcmR n=2 Tax=Rhizobiales RepID=DCMR_METED
Transcriptional repressor of DCM dehalogenase {ECO:0000313|EMBL:AHN97947.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
dcmR; transcriptional repressor of DCM dehalogenase
13_1_40cm_scaffold_7114_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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1499..2221
DNA (723bp) protein (241aa)
Crp-like helix-turn-helix domain protein n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6I550_9LEPT
Crp/Fnr family transcriptional regulator Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Crp/Fnr family transcriptional regulator
13_1_40cm_scaffold_7114_4
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2218..2619)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FP36_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD41257.1}; TaxID=323259 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospiril
13_1_40cm_scaffold_7114_5
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2616..3185)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei 406e RepID=A8EAK1_BURPE
Putative uncharacterized protein {ECO:0000313|EMBL:EDO83704.1}; TaxID=360118 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.
glcNAc-PI de-N-acetylase family protein
13_1_40cm_scaffold_7114_6
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3260..3784)
DNA (525bp) protein (175aa)
Intracellular protease, PfpI family n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GF22_METPE
Pfpi family intracellular protease
Intracellular protease, PfpI family {ECO:0000313|EMBL:ACL17828.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Met
13_1_40cm_scaffold_7114_7
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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3892..4866
DNA (975bp) protein (325aa)
RNA polymerase sigma factor SigA n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXH1_HALOH
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothri
13_1_40cm_scaffold_7114_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(4872..5111)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XD14_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV79617.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700
13_1_40cm_scaffold_7114_9
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5597..5908
DNA (312bp) protein (104aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJP4_9RHIZ
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:CCV12359.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesor
rhtB; homoserine/threonine efflux protein
13_1_40cm_scaffold_7114_10
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5986..6375
DNA (390bp) protein (130aa)
Amino acid-binding ACT domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFC0_ANASK
amino acid-binding ACT domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:GAO02390.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_scaffold_7114_11
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6424..7062)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MV85_9ACTO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CEL14523.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporang
TetR family transcriptional regulator
13_1_40cm_scaffold_7114_12
unknown

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7165..7620
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_scaffold_7114_13
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7617..8549
DNA (933bp) protein (311aa)
Puromycin resistance protein Pur8 n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WCR6_9ACTO
Puromycin resistance protein Pur8 {ECO:0000313|EMBL:EFL22995.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicu
EmrB/QacA subfamily drug resistance transporter
13_1_40cm_scaffold_7114_14
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8549..8962
DNA (414bp) protein (138aa)
Puromycin resistance protein pur8 n=1 Tax=Streptomyces sp. CNT372 RepID=UPI0003679FA9
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:EIF90346.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyce
Puromycin resistance protein pur8
13_1_40cm_scaffold_7114_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9037..9291
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003070B6D
Regulatory protein ArsR {ECO:0000313|EMBL:EHK55100.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alh
ArsR family transcriptional regulator
13_1_40cm_scaffold_7114_16
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9288..9794
DNA (507bp) protein (169aa)
Glutathione S-transferase transmembrane protein n=2 Tax=Methanosarcina mazei RepID=M1QG36_METMZ
ATPase {ECO:0000313|EMBL:KKG25460.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
Glutathione S-transferase transmembrane protein
13_1_40cm_scaffold_7114_17
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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9862..10215
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0002F8FE39
hypothetical protein Tax=RBG_16_Chloroflexi_51_9_curated
hypothetical protein
13_1_40cm_scaffold_7114_18
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10166..10786)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FGZ6_PAEMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI46297.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain
13_1_40cm_scaffold_7114_19
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10824..11471
DNA (648bp) protein (216aa)
Putative membrane protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F674_ACIC5
Uncharacterized protein {ECO:0000313|EMBL:GAN76195.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera ru
hypothetical protein
13_1_40cm_scaffold_7114_20
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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11523..12059
DNA (537bp) protein (179aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LMI9_BURGS
Uncharacterized protein {ECO:0000313|EMBL:ETX06112.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
short-chain dehydrogenase/reductase SDR
Displaying 20 items

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