ggKbase home page

13_1_40cm_scaffold_1663

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1663_1
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..515)
DNA (513bp) protein (171aa)
DEAD/DEAH box helicase-like; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
DEAD/DEAH box helicase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMK6_KORVE
DEAD/DEAH box helicase
13_1_40cm_scaffold_1663_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(836..1162)
DNA (327bp) protein (109aa)
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein; K09747 hypothetical protein id=12556304 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_1663_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1162..2958)
DNA (1797bp) protein (599aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
DNA polymerase III, tau subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ74_KORVE
DNA polymerase III subunits gamma and tau
13_1_40cm_scaffold_1663_4
unknown

Not on your lists

3086..3313
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_scaffold_1663_5

Not on your lists

comp(3322..3843)
DNA (522bp) protein (174aa)
Anti-ECF sigma factor ChrR n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FNT9_9RHIZ
Cupin domain protein {ECO:0000313|EMBL:AIA10621.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_scaffold_1663_6
unknown

Not on your lists

comp(3923..4309)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_scaffold_1663_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(4390..5004)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6Y6_NIAKG
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_scaffold_1663_8
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5458..6234)
DNA (777bp) protein (259aa)
Transcriptional regulatory protein zraR n=1 Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WQU8_DESPC
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
zraR; Transcriptional regulatory protein zraR
13_1_40cm_scaffold_1663_9
unknown

Not on your lists

comp(6910..7128)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_scaffold_1663_10
unknown

Not on your lists

comp(7193..7498)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_scaffold_1663_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7651..8358)
DNA (708bp) protein (236aa)
peptidase, M50 family (EC:3.4.24.-)
peptidase M50 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Zn-dependent protease id=2964357 bin=GWC2_Nitrospirae_57_13 species=Methylophaga lonarensis genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
13_1_40cm_scaffold_1663_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(8569..11133)
DNA (2565bp) protein (855aa)
permease n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E357A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82870.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_scaffold_1663_13
unknown

Not on your lists

11480..11764
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_scaffold_1663_14
unknown

Not on your lists

11851..12096
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_scaffold_1663_15
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

12338..13030
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XKD2_LEEBM
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
hypothetical protein
13_1_40cm_scaffold_1663_16
unknown

Not on your lists

13141..13311
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_scaffold_1663_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13227..14816)
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035C7E84
sporulation domain-containing protein
Sporulation domain protein {ECO:0000313|EMBL:ABJ85063.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usit
13_1_40cm_scaffold_1663_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15032..15616)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P142_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34459.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
13_1_40cm_scaffold_1663_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15759..16208
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP31_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41369.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
Displaying 19 items

View Taxonomy