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13_1_40cm_scaffold_181

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_181_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1..678)
DNA (678bp) protein (226aa)
TolB-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU53_KORVE
TolB-like protein
TolB-like protein {ECO:0000313|EMBL:ABF39597.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter vers
13_1_40cm_scaffold_181_2
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(675..1466)
DNA (792bp) protein (264aa)
Cell division and transport-associated protein TolA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU52_KORVE
TonB-like protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
TonB-like protein
13_1_40cm_scaffold_181_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1463..1885)
DNA (423bp) protein (141aa)
Cell division and transport-associated protein TolR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU51_KORVE
biopolymer transport protein ExbD/TolR
Cell division and transport-associated protein TolR {ECO:0000313|EMBL:ABF39599.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="
13_1_40cm_scaffold_181_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1885..2568)
DNA (684bp) protein (228aa)
Cell division and transport-associated protein TolQ id=1960472 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
MotA/TolQ/ExbB proton channel; K03562 biopolymer transport protein TolQ Tax=GWD2_Deltaproteobacteria_55_8_curated
MotA/TolQ/ExbB proton channel
13_1_40cm_scaffold_181_5
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2625..4298
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036BA5CD
DNA recombination protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadale
13_1_40cm_scaffold_181_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

4365..4850
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RU4_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87626.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_scaffold_181_7
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(4854..6911)
DNA (2058bp) protein (686aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2G3_ANATU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ62769.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophi
13_1_40cm_scaffold_181_8
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(6914..7534)
DNA (621bp) protein (207aa)
F420-dependent NADPH reductase; K06988 id=1245137 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
F420-dependent NADPH reductase; K06988 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
NADPH-dependent F420 reductase
13_1_40cm_scaffold_181_9

Not on your lists

comp(7531..8265)
DNA (735bp) protein (245aa)
Coenzyme F420-0 gamma-glutamyl ligase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SDD3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL60495.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cofE; F420-0:gamma-glutamyl ligase
13_1_40cm_scaffold_181_10
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(8262..8888)
DNA (627bp) protein (209aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SDD2_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL54168.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
2-phospho-L-lactate guanylyltransferase CofC
13_1_40cm_scaffold_181_11
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(8863..9810)
DNA (948bp) protein (316aa)
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SDD1_9BACT
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:BAL54167.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
LPPG:FO 2-phospho-L-lactate transferase
13_1_40cm_scaffold_181_12
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(10034..10957)
DNA (924bp) protein (308aa)
Arabinose efflux permease n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK95_CHLTF
Arabinose efflux permease
Arabinose efflux permease {ECO:0000313|EMBL:AEP13582.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (st
13_1_40cm_scaffold_181_13
unknown

Not on your lists

comp(10954..11544)
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_scaffold_181_14
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(11544..12431)
DNA (888bp) protein (296aa)
coproporphyrinogen oxidase (EC:1.3.3.3)
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJY2_9BACT
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprop
13_1_40cm_scaffold_181_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12461..13834
DNA (1374bp) protein (458aa)
Putative Peptidase M20 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8T6_9BACT
putative peptidase M20
Putative Peptidase M20 {ECO:0000313|EMBL:CBK43918.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_scaffold_181_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(13799..14185)
DNA (387bp) protein (129aa)
PAS domain S-box protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DG12_9BURK
PAS domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
GAF sensor hybrid histidine kinase
13_1_40cm_scaffold_181_17
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

14380..15678
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00035FC382
multi-sensor hybrid histidine kinase
Tax=BJP_IG2102_Coriobacteriales_64_17
13_1_40cm_scaffold_181_18
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

15650..17050
DNA (1401bp) protein (467aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDM5_ANADF
Fis family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
two component sigma54 specific Fis family transcriptional regulator
13_1_40cm_scaffold_181_19
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(17051..18187)
DNA (1137bp) protein (379aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein id=12555584 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_181_20
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18336..18818
DNA (483bp) protein (161aa)
Acetyltransferase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1M2_DESTA
Acetyltransferase {ECO:0000313|EMBL:AFM23463.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei
N-acetyltransferase GCN5
13_1_40cm_scaffold_181_21
unknown

Not on your lists

comp(18815..19438)
DNA (624bp) protein (208aa)

This feature has no annotations

13_1_40cm_scaffold_181_22
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

19458..19901
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=L9KCU5_9DELT id=5225136 bin=16ft_combo_ws3_JS1 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
molybdenum cofactor sulfurase domain containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_scaffold_181_23
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

20067..20702
DNA (636bp) protein (212aa)
thiD; bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase (EC:2.7.4.7 2.7.1.49)
Bifunctional: hydroxy-methylpyrimidine kinase (HMP kinase) hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase) {ECO:0000313|EMBL:CBE67785.1}; EC=2.7.1.49 {ECO:0000313|EMBL:CBE67785.1};; EC=2.7.4.7 {
Bifunctional: hydroxy-methylpyrimidine kinase (HMP kinase) hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLB9_9BACT
13_1_40cm_scaffold_181_24
unknown

Not on your lists

20704..21033
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_scaffold_181_25
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(21223..21675)
DNA (453bp) protein (151aa)
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AJW70263.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
hypothetical protein id=24518186 bin=RBG_19FT_COMBO_GAL15_69_19 species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Displaying 25 items

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