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13_1_40cm_scaffold_2054

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2054_1
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists

1..1104
DNA (1104bp) protein (368aa)
rfaG; glycosyltransferase Tax=CG_Omnitr_04
Glycosyltransferase id=4325557 bin=GWC2_OP3-like_45_7 species=unknown genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
rfaG; glycosyltransferase
13_1_40cm_scaffold_2054_2
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

1655..2707
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4P0_NITHN
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
hypothetical protein
13_1_40cm_scaffold_2054_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

2704..3678
DNA (975bp) protein (325aa)
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V5B4_TERSS
acetyl-CoA carboxylase, carboxyl transferase subunit beta
13_1_40cm_scaffold_2054_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

3688..4998
DNA (1311bp) protein (437aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransfera
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR1_9BACT
gid; tRNA (uracil-5-)-methyltransferase Gid
13_1_40cm_scaffold_2054_5
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4968..5822
DNA (855bp) protein (285aa)
Aminotransferase class IV n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDP4_ANADF
class IV aminotransferase
Aminotransferase class IV {ECO:0000313|EMBL:ABS26840.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_scaffold_2054_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5826..6728
DNA (903bp) protein (301aa)
Tyrosine recombinase XerC n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8N8_GEOUR
tyrosine recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter ura
13_1_40cm_scaffold_2054_7
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6797..7108
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ACW8_THEID
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desu
13_1_40cm_scaffold_2054_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


7134..7391
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4E963
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
50S ribosomal protein L27
13_1_40cm_scaffold_2054_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

7466..8473
DNA (1008bp) protein (336aa)
GTPase Obg n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=OBG_SOLUE
obgE; GTPase ObgE
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; C
13_1_40cm_scaffold_2054_10
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8475..9344
DNA (870bp) protein (290aa)
Nuclear protein SET n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GDB9_9FIRM
hypothetical protein
Lysine methyltransferase {ECO:0000313|EMBL:AHF06539.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallir
13_1_40cm_scaffold_2054_11
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

9373..9990
DNA (618bp) protein (206aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=GWC2_Nitrospirae_57_13_curated
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase id=1962284 bin=GWD2_Nitrospirae-related_57_8 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
13_1_40cm_scaffold_2054_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

10014..10379
DNA (366bp) protein (122aa)
Ribosomal silencing factor RsfS n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVS3_KORVE
Iojap-related protein; K09710 ribosome-associated protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Iojap-related protein
13_1_40cm_scaffold_2054_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10450..11337
DNA (888bp) protein (296aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVS2_KORVE
Fis family transcriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABF39028.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sourc
13_1_40cm_scaffold_2054_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11334..11753
DNA (420bp) protein (140aa)
rlmH; ribosomal RNA large subunit methyltransferase H (EC:2.1.1.-) Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LHN9_9BACT
hypothetical protein
13_1_40cm_scaffold_2054_15
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11865..12479
DNA (615bp) protein (205aa)
Putative Phosphoribosyltransferase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z2E1_9BACT
phosphoribosyltransferase
phosphoribosyltransferase Tax=RBG_16_Deltaproteobacteria_54_11_curated
13_1_40cm_scaffold_2054_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(12431..13303)
DNA (873bp) protein (291aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_cura
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F894_ACIC5
13_1_40cm_scaffold_2054_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

13421..15913
DNA (2493bp) protein (831aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DA6_SOLUE
13_1_40cm_scaffold_2054_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15929..17437)
DNA (1509bp) protein (503aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas haloplanktis ANT/505 RepID=F3BGL4_PSEHA
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66929.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
metallopeptidase
13_1_40cm_scaffold_2054_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17437..18780)
DNA (1344bp) protein (448aa)
Peptidase M16-like protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKW3_ANADE
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66930.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M16-like protein
13_1_40cm_scaffold_2054_20
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

18800..20233
DNA (1434bp) protein (478aa)
Nucleotidase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YAM6_DICT6
nucleotidase
Tax=BJP_IG2102_Elusimicrobia_52_42
13_1_40cm_scaffold_2054_21
unknown

Not on your lists

comp(20446..21042)
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_scaffold_2054_22
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21231..23429)
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WL53_VEREI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM58360.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobact
Displaying 22 items

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