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13_1_40cm_scaffold_2757

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2757_1
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1..681)
DNA (681bp) protein (227aa)
Putative polysaccharide deacetylase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8S0_ACIC5
polysaccharide deacetylase
Putative polysaccharide deacetylase {ECO:0000313|EMBL:ACO33811.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulat
13_1_40cm_scaffold_2757_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(683..2056)
DNA (1374bp) protein (458aa)
Carotene 7,8-desaturase {ECO:0000313|EMBL:ABF40748.1}; EC=1.3.5.6 {ECO:0000313|EMBL:ABF40748.1};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
Carotene 7,8-desaturase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQV2_KORVE
carotene 7,8-desaturase
13_1_40cm_scaffold_2757_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(2038..2949)
DNA (912bp) protein (304aa)
Phytoene/squalene synthetase (EC:2.5.1.32) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21)
Farnesyl-diphosphate farnesyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029L6_SOLUE
13_1_40cm_scaffold_2757_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(2915..3829)
DNA (915bp) protein (305aa)
phytoene synthase-related protein (EC:2.5.1.-) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Squalene synthase HpnC n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EX58_9BACT
squalene synthase HpnC
13_1_40cm_scaffold_2757_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(3832..4866)
DNA (1035bp) protein (345aa)
alcohol dehydrogenase; K00008 L-iditol 2-dehydrogenase [EC:1.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQV5_KORVE
zinc-binding alcohol dehydrogenase
13_1_40cm_scaffold_2757_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4887..5987)
DNA (1101bp) protein (367aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029L9_SOLUE
alcohol dehydrogenase
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ABJ82257.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_scaffold_2757_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5987..6751)
DNA (765bp) protein (255aa)
Purine or other phosphorylase family 1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH07_9BACT
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:EEF60928.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.
Purine or other phosphorylase family 1
13_1_40cm_scaffold_2757_8
R_WOR_2_68_15, WOR-2, Bacteria

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comp(6768..7802)
DNA (1035bp) protein (345aa)
hopanoid-associated sugar epimerase (EC:1.1.1.219) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037A8A77
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_2757_9
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(7781..8788)
DNA (1008bp) protein (336aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R5V5_ISOPI
hopanoid biosynthesis associated radical SAM protein HpnH Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hopanoid biosynthesis associated radical SAM protein HpnH
13_1_40cm_scaffold_2757_10
R_WOR_2_68_15, WOR-2, Bacteria

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comp(8785..10749)
DNA (1965bp) protein (655aa)
squalene cyclase; K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVH8_9BACT
13_1_40cm_scaffold_2757_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(10886..11842)
DNA (957bp) protein (319aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029M3_SOLUE
13_1_40cm_scaffold_2757_12
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

11989..12693
DNA (705bp) protein (235aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZA8_ROSS1
hydrolase
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ABQ91961.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;"
13_1_40cm_scaffold_2757_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12690..14183)
DNA (1494bp) protein (498aa)
Fe-S protein, radical SAM family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPN3_KORVE
radical SAM protein
Fe-S protein, radical SAM family {ECO:0000313|EMBL:ABF41167.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_1_40cm_scaffold_2757_14

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comp(14215..14661)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000366CAA5
Uncharacterized protein {ECO:0000313|EMBL:KKK55821.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 14 items

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