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13_1_40cm_scaffold_2870

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2870_1
unknown

Not on your lists

comp(3..113)
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_scaffold_2870_2
unknown

Not on your lists

915..1163
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_scaffold_2870_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1178..2959)
DNA (1782bp) protein (594aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=12557837 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
13_1_40cm_scaffold_2870_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

3388..3897
DNA (510bp) protein (170aa)
Translation initiation factor IF-3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITT2_KORVE
translation initiation factor 3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
translation initiation factor 3
13_1_40cm_scaffold_2870_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists


4108..4473
DNA (366bp) protein (122aa)
50S ribosomal protein L20 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=RL20_THERP
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (stra
13_1_40cm_scaffold_2870_6
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


4504..5544
DNA (1041bp) protein (347aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=SYFA_GEODF
pheS; phenylalanyl-tRNA synthetase subunit alpha
13_1_40cm_scaffold_2870_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


5541..7556
DNA (2016bp) protein (672aa)
phenylalanyl-tRNA synthetase beta subunit; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
phenylalanyl-tRNA synthetase subunit beta, non-spirochete bacterial (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG36_CHLTF
13_1_40cm_scaffold_2870_8
unknown

Not on your lists

7567..7800
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_scaffold_2870_9
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7793..8071
DNA (279bp) protein (93aa)
cell division protein ZapA; K09888 cell division protein ZapA Tax=RBG_13_Deltaproteobacteria_52_11_curated
13_1_40cm_scaffold_2870_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

8305..9081
DNA (777bp) protein (259aa)
metallophosphoesterase; K09769 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
metallophosphoesterase; K09769 hypothetical protein id=7201253 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
metallophosphoesterase
13_1_40cm_scaffold_2870_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


9099..10442
DNA (1344bp) protein (448aa)
Signal recognition particle protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024L4_SOLUE
signal recognition particle subunit FFH/SRP54 (srp54)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales
13_1_40cm_scaffold_2870_12
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists


10488..10736
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IHT3_9CHLR
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
30S ribosomal protein S16p
13_1_40cm_scaffold_2870_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

10869..11099
DNA (231bp) protein (77aa)
UPF0109 protein Acid_2571 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024L6_SOLUE
RNA-binding protein; K06960 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
RNA-binding protein
13_1_40cm_scaffold_2870_14
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

11232..11636
DNA (405bp) protein (135aa)
Ribosome maturation factor RimM n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RIMM_SYNFM
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
16S rRNA processing protein RimM
13_1_40cm_scaffold_2870_15
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

11633..12325
DNA (693bp) protein (231aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIU4_9BACT
tRNA (Guanine37-N(1)-) methyltransferase
13_1_40cm_scaffold_2870_16
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists


12337..12687
DNA (351bp) protein (117aa)
50S ribosomal protein L19 n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIU3_9BACT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bac
50S ribosomal protein L19
13_1_40cm_scaffold_2870_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

12758..13024
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024M3_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_scaffold_2870_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13021..13557
DNA (537bp) protein (179aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZK7_9BACT
13_1_40cm_scaffold_2870_19
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(13897..14529)
DNA (633bp) protein (211aa)
hypothetical protein Tax=CG_Arma_02
Putative uncharacterized protein id=4918823 bin=GWC2_Methylomirabilis_70_24 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Displaying 19 items

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