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13_1_40cm_scaffold_301

Search features with annotation key words

Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_301_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2..736
DNA (735bp) protein (245aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_301_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

733..1815
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000368C90A
Zn-dependent hydrolases Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
beta-lactamase
13_1_40cm_scaffold_301_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1880..2665
DNA (786bp) protein (262aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_301_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

3001..3753
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2Y1_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_scaffold_301_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3820..4233)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036BEC4D
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_301_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4393..5547
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WG0_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_301_7
unknown

Not on your lists

5630..6085
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_scaffold_301_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

6061..7974
DNA (1914bp) protein (638aa)
Thiamine pyrophosphate enzyme domain protein TPP-binding n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RF5_SOLUE
thiamine pyrophosphate binding domain-containing protein
Thiamine pyrophosphate enzyme domain protein TPP-binding {ECO:0000313|EMBL:ABJ87765.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae;
13_1_40cm_scaffold_301_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7984..8484
DNA (501bp) protein (167aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_301_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(8526..9686)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036CC4FB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
signal peptide
13_1_40cm_scaffold_301_11
CG_ACD39_01, ACD39, Bacteria

Not on your lists

comp(9820..10044)
DNA (225bp) protein (75aa)
Carbon storage regulator homolog n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=CSRA_SYNAS
csrA; carbon storage regulator; K03563 carbon storage regulator Tax=CG_ACD39_01
carbon storage regulator
13_1_40cm_scaffold_301_12
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(10434..10673)
DNA (240bp) protein (80aa)
Carbon storage regulator homolog id=4417047 bin=GWF2_Lentisphaerae_52_8 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
carbon storage regulator, CsrA Tax=GWF2_Lentisphaerae_52_8_curated
carbon storage regulator CsrA
13_1_40cm_scaffold_301_13
Mucispirillum schaedleri, Mucispirillum, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(10770..11459)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Mucispirillum schaedleri ASF457 RepID=V2QGV9_9BACT
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1379858 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Mucispirillum.;" source="Mucispirillum schaed
flagellar assembly protein FliW
13_1_40cm_scaffold_301_14
unknown

Not on your lists

comp(11462..11779)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_scaffold_301_15
unknown

Not on your lists

comp(11798..12082)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_scaffold_301_16
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12127..12423)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000371A7A5
peptidase M23
Tax=BJP_IG2069_Desfulfarculales_53_13
13_1_40cm_scaffold_301_17
unknown

Not on your lists

comp(12413..12754)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_scaffold_301_18
unknown

Not on your lists

comp(12893..13336)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_scaffold_301_19
Denitrovibrio acetiphilus, Denitrovibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(13302..13601)
DNA (300bp) protein (100aa)
Flagellar motor switch protein FliN n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H6C7_DENA2
flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:ADD69601.1}; TaxID=522772 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Denitrovibrio.;" source="Denitrovibrio acetip
13_1_40cm_scaffold_301_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13582..14490)
DNA (909bp) protein (303aa)
Flagellar motor switch protein FliM n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P027_9BACT
Flagellar motor switch protein FliM {ECO:0000313|EMBL:CDM65653.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
flagellar motor switch protein FliM
13_1_40cm_scaffold_301_21
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14497..15240)
DNA (744bp) protein (248aa)
RNA polymerase sigma factor n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P026_9BACT
fliA; RNA polymerase sigma factor for flagellar operon Tax=RBG_13_Deltaproteobacteria_65_10_curated
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
13_1_40cm_scaffold_301_22
Planomicrobium sp. ES2, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15237..16373)
DNA (1137bp) protein (379aa)
GTP-binding signal recognition particle SRP54 G-domain protein n=1 Tax=Planococcus donghaensis MPA1U2 RepID=E7RJ23_9BACL
Flagellar biosynthesis protein FlhF {ECO:0000313|EMBL:CEG24321.1}; TaxID=1499687 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium sp. ES2.;"
flagellar biosynthetic protein flhf
13_1_40cm_scaffold_301_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16370..18403)
DNA (2034bp) protein (678aa)
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:CDM65649.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA id=12556374 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
flagellar biosynthesis protein FlhA
13_1_40cm_scaffold_301_24
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18449..19492)
DNA (1044bp) protein (348aa)
flagellar biosynthesis protein FlhB n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI00030D4E79
flagellar biosynthetic protein FlhB; K02401 flagellar biosynthetic protein FlhB Tax=RBG_13_Deltaproteobacteria_52_11b_curated
flhB; flagellar biosynthesis protein FlhB
13_1_40cm_scaffold_301_25
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19494..20243)
DNA (750bp) protein (250aa)
flagellar biosynthetic protein FliR; K02421 flagellar biosynthetic protein FliR Tax=RBG_13_Deltaproteobacteria_58_19_curated
flagellar biosynthetic protein FliR; K02421 flagellar biosynthetic protein FliR id=12556376 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
flagellar biosynthetic protein FliR
13_1_40cm_scaffold_301_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20247..20516)
DNA (270bp) protein (90aa)
Flagellar biosynthesis pathway, component FliQ {ECO:0000313|EMBL:CDM65628.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliph
fliQ; flagellar biosynthesis protein FilQ id=12556377 bin=CNBR_ACIDO species=Lawsonia intracellularis genus=Lawsonia taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
fliQ; flagellar biosynthetic protein fliQ
13_1_40cm_scaffold_301_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20509..21228)
DNA (720bp) protein (240aa)
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3)
Flagellar biosynthetic protein FliP n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAW3_GEOLS
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:CDM65629.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_40cm_scaffold_301_28
unknown

Not on your lists

comp(21225..21461)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_scaffold_301_29
Exiguobacterium sp. S17, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21458..21754)
DNA (297bp) protein (99aa)
CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FMH7_9BACL
CheC, inhibitor of MCP methylation / FliN fusion protein {ECO:0000313|EMBL:EPE63099.1}; TaxID=856854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguoba
fliN; flagellar motor switch protein FliN
13_1_40cm_scaffold_301_30
unknown

Not on your lists

comp(22139..22330)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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