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13_1_40cm_scaffold_10058

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_10058_1
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(136..1710)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A2A2_PELCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA89505.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbin
13_1_40cm_scaffold_10058_2
unknown

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1904..2386
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_scaffold_10058_3

Not on your lists

2917..3177
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF61_9BACT
Marine sediment metagenome DNA, contig: S01H4_S10182 {ECO:0000313|EMBL:GAG99346.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_scaffold_10058_4
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3229..3471)
DNA (243bp) protein (81aa)
PilT protein domain-containing protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PilT protein domain-containing protein
13_1_40cm_scaffold_10058_5
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3831..4112
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PNH7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KIF36657.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
13_1_40cm_scaffold_10058_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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4151..4633
DNA (483bp) protein (161aa)
Putative transcription regulator containing HTH domain n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHC2_SINAD
transcription regulator containing HTH domain
Putative transcription regulator containing HTH domain {ECO:0000313|EMBL:AGA28213.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaer
13_1_40cm_scaffold_10058_7
unknown

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5142..5375
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_scaffold_10058_8

Not on your lists

5460..5717
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=U5NML4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY30863.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_scaffold_10058_9

Not on your lists

5756..5941
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=U5NML4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGY30863.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_scaffold_10058_10
unknown

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5996..6304
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_scaffold_10058_11
unknown

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6420..6617
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_scaffold_10058_12
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

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6624..7004
DNA (381bp) protein (127aa)
hypothetical protein Tax=RBG_13_OP3X_46_9_curated
13_1_40cm_scaffold_10058_13
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

7243..7605
DNA (363bp) protein (121aa)
putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
13_1_40cm_scaffold_10058_14
unknown

Not on your lists

comp(7759..7995)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_scaffold_10058_15
unknown

Not on your lists

8423..8590
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_scaffold_10058_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(8656..9900)
DNA (1245bp) protein (415aa)
Putative GAF sensor protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y41_SOLUE
GAF sensor protein
Putative GAF sensor protein {ECO:0000313|EMBL:ABJ85424.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usi
13_1_40cm_scaffold_10058_17

Not on your lists

10173..10544
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1D0J5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD75054.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_40cm_scaffold_10058_18
unknown

Not on your lists

10794..11264
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_scaffold_10058_19
unknown

Not on your lists

11227..11532
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_scaffold_10058_20
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11694..12389)
DNA (696bp) protein (232aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Geobacter sp. (strain M18) RepID=E8WS16_GEOS8
PhoU family transcriptional regulator
phosphate transport system regulatory protein PhoU Tax=RifOxyA12_full_Proteobacteria_58_15_curated
13_1_40cm_scaffold_10058_21
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(12419..14497)
DNA (2079bp) protein (693aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEF3_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11616.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
13_1_40cm_scaffold_10058_22
unknown

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comp(15378..15773)
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying 22 items

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