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13_1_40cm_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 56 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_106_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

13_1_40cm_scaffold_106_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

394..894
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367174A
transcription termination factor NusG domain protein Tax=CSP1_5_NC10
NusG antitermination factor
13_1_40cm_scaffold_106_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(911..1276)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E491F
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
transcriptional regulator
13_1_40cm_scaffold_106_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1269..1865)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DB688
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_106_5
unknown

Not on your lists

2326..2481
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_scaffold_106_6
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(2619..3422)
DNA (804bp) protein (268aa)
accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=2 Tax=Geobacter metallireducens RepID=ACCA_GEOMG
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha
13_1_40cm_scaffold_106_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(3503..6946)
DNA (3444bp) protein (1148aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02D38_SOLUE
13_1_40cm_scaffold_106_8
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7005..8537)
DNA (1533bp) protein (511aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F486_ACIC5
13_1_40cm_scaffold_106_9
unknown

Not on your lists

comp(8521..9459)
DNA (939bp) protein (313aa)

This feature has no annotations

13_1_40cm_scaffold_106_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(9459..10457)
DNA (999bp) protein (333aa)
aspartate semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Aspartate semialdehyde dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP41_KORVE
aspartate semialdehyde dehydrogenase
13_1_40cm_scaffold_106_11
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(10458..11291)
DNA (834bp) protein (278aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3M5_ACIC5
13_1_40cm_scaffold_106_12
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(11307..11909)
DNA (603bp) protein (201aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] Tax=GWA2_RIF03_38_11_curated
phosphatidylserine decarboxylase (EC:4.1.1.65)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00037802E9
13_1_40cm_scaffold_106_13
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(12010..12252)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BT4_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_40cm_scaffold_106_14
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12321..12797)
DNA (477bp) protein (159aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ABB15346.1}; EC=2.3.1.128 {ECO:0000313|EMBL:ABB15346.1};; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales;
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003799A42
13_1_40cm_scaffold_106_15
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12769..13452)
DNA (684bp) protein (228aa)
Peptidase M22, glycoprotease n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJ71_SYNFM
peptidase M22, glycoprotease
Peptidase M22, glycoprotease {ECO:0000313|EMBL:ABK17473.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="S
13_1_40cm_scaffold_106_16
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

13492..14523
DNA (1032bp) protein (344aa)
6-phosphofructokinase (EC:2.7.1.11) Tax=RBG_16_Planctomycetes_43_13_curated
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7L0Z7_METBM
13_1_40cm_scaffold_106_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

14525..17143
DNA (2619bp) protein (873aa)
DNA mismatch repair protein MutS n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=MUTS_SOLUE
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
DNA mismatch repair protein MutS
13_1_40cm_scaffold_106_18
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

17148..18242
DNA (1095bp) protein (365aa)
beta-glucosidase-related glycosidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacteri
Beta-glucosidase-related glycosidase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS2_CHLTF
13_1_40cm_scaffold_106_19
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

18294..19802
DNA (1509bp) protein (503aa)
ABC peptide transporter, periplasmic ligand binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ61_KORVE
ABC peptide transporter, periplasmic ligand binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
peptide ABC transporter substrate-binding protein
13_1_40cm_scaffold_106_20
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(19839..20390)
DNA (552bp) protein (184aa)
hypothetical protein id=12554332 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
secreted glycosyl hydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_scaffold_106_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(20532..21134)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VH1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86344.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_scaffold_106_22
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21131..21766)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFC4_9BACT
translation factor SUA5; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_40cm_scaffold_106_23
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

21827..22591
DNA (765bp) protein (255aa)
RNA methyltransferase, TrmH family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3I9_ACIC5
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
TrmH family RNA methyltransferase
13_1_40cm_scaffold_106_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

22640..23473
DNA (834bp) protein (278aa)
3-demethylubiquinone-9 3-O-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] Tax=RBG_16_RIF_WS3X_71_46
Methyltransferase type 11 n=1 Tax=Frankia sp. CN3 RepID=G6HJZ2_9ACTO id=5223769 bin=16ft_combo_ws3_JS1 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_scaffold_106_25

Not on your lists

23506..25557
DNA (2052bp) protein (684aa)
Marine sediment metagenome DNA, contig: S01H1_L03310 {ECO:0000313|EMBL:GAF68879.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
Glycosyl transferase family 39 id=1864268 bin=GWB2_Elusimicrobium_63_22 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
13_1_40cm_scaffold_106_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

25710..27011
DNA (1302bp) protein (434aa)
Recombination protein MgsA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IND5_KORVE
recombination factor protein RarA
Recombination protein MgsA {ECO:0000313|EMBL:ABF41615.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (st
13_1_40cm_scaffold_106_27
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(27073..27501)
DNA (429bp) protein (143aa)
CoA-binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SF4_SOLUE
CoA-binding domain-containing protein; K06929 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
CoA-binding domain-containing protein
13_1_40cm_scaffold_106_28
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(27498..28580)
DNA (1083bp) protein (361aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=GWC2_Nitrospirae_57_13_curated
Histidinol-phosphate aminotransferase id=3846051 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
histidinol-phosphate aminotransferase
13_1_40cm_scaffold_106_29
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(28577..29296)
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidoba
Pseudouridine synthase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYL7_9BACT
pseudouridine synthase rsuA family protein
13_1_40cm_scaffold_106_30
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(29349..29921)
DNA (573bp) protein (191aa)
Condensin subunit ScpB n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SF6_SOLUE
condensin subunit ScpB; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
condensin subunit ScpB
Displaying items 1-30 of 56 in total

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