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13_1_40cm_scaffold_1267

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1267_1
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

2..109
DNA (108bp) protein (36aa)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu Tax=RBG_13_OP8X_37_8_curated
elongation factor Tu n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003655271
tuf; elongation factor Tu
13_1_40cm_scaffold_1267_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


199..528
DNA (330bp) protein (110aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=12555580 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsJ; 30S ribosomal protein S10
13_1_40cm_scaffold_1267_3
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


525..1154
DNA (630bp) protein (210aa)
50S ribosomal protein L3 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL3_SOLUE
50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
50S ribosomal protein L3P
13_1_40cm_scaffold_1267_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


1156..1782
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL4_SOLUE
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
rplD; 50S ribosomal protein L4
13_1_40cm_scaffold_1267_5
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


1779..2072
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B40629
50S ribosomal protein L25
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain AT
13_1_40cm_scaffold_1267_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


2072..2896
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL2_KORVE
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (
13_1_40cm_scaffold_1267_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


2898..3275
DNA (378bp) protein (126aa)
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rpsS; ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=12555575 bin=CNBR_ACIDO species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsS; 30S ribosomal protein S19
13_1_40cm_scaffold_1267_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


3311..3619
DNA (309bp) protein (103aa)
50S ribosomal protein L22 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL22_SOLUE
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000255|HAMAP-Rule:MF_01331}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
13_1_40cm_scaffold_1267_9
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists


3619..4281
DNA (663bp) protein (221aa)
30S ribosomal protein S3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS3_KORVE
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
30S ribosomal protein S3
13_1_40cm_scaffold_1267_10
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists


4285..4710
DNA (426bp) protein (142aa)
50S ribosomal protein L16 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL16_KORVE
rplP; 50S ribosomal protein L16
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_40cm_scaffold_1267_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


4707..4913
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003680B0C
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_scaffold_1267_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


4916..5257
DNA (342bp) protein (114aa)
30S ribosomal protein S17 n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003641705
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
rpsQ; 30S ribosomal protein S17
13_1_40cm_scaffold_1267_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists


5263..5634
DNA (372bp) protein (124aa)
50S ribosomal protein L14 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL14_SOLUE
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
rplN; 50S ribosomal protein L14
13_1_40cm_scaffold_1267_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


5635..5961
DNA (327bp) protein (109aa)
50S ribosomal protein L24 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL24_CARHZ
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
rplX; 50S ribosomal protein L24
13_1_40cm_scaffold_1267_15
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists


5958..6602
DNA (645bp) protein (215aa)
50S ribosomal protein L5 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISB0_KORVE
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
rplE; 50S ribosomal protein L5
13_1_40cm_scaffold_1267_16
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists


6696..6881
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z id=1251141 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
30S ribosomal protein S14
13_1_40cm_scaffold_1267_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


6897..7289
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371442F
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (
13_1_40cm_scaffold_1267_18
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


7351..7890
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6F831
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
50S ribosomal protein L6
13_1_40cm_scaffold_1267_19
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


7893..8258
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SEN6_9BACL
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C
50S ribosomal protein L18
13_1_40cm_scaffold_1267_20
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


8260..8766
DNA (507bp) protein (169aa)
30S ribosomal protein S5 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037686F7
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
rpsE; 30S ribosomal protein S5
13_1_40cm_scaffold_1267_21
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


8770..8973
DNA (204bp) protein (68aa)
50S ribosomal protein L30 n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003716A4F
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="T
13_1_40cm_scaffold_1267_22
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9239..9529
DNA (291bp) protein (97aa)
50S ribosomal protein L15 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKG7_DESK7
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" s
13_1_40cm_scaffold_1267_23
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


9526..10896
DNA (1371bp) protein (457aa)
Protein translocase subunit SecY n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISA2_KORVE
protein translocase subunit SecY/sec61 alpha; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
protein translocase subunit secY/sec61 alpha
13_1_40cm_scaffold_1267_24
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

10896..11582
DNA (687bp) protein (229aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00
Adenylate kinase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXQ0_FERPA
adenylate kinase
13_1_40cm_scaffold_1267_25
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11624..11842
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=IF1_KORVE
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_1_40cm_scaffold_1267_26
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


11974..12360
DNA (387bp) protein (129aa)
30S ribosomal protein S13 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS13_SOLUE
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
13_1_40cm_scaffold_1267_27
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


12501..12896
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS11_SOLUE
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
13_1_40cm_scaffold_1267_28
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


12897..13526
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=RS4_ACIC5
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
rpsD; 30S ribosomal protein S4
13_1_40cm_scaffold_1267_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13537..14541
DNA (1005bp) protein (335aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RPOA_KORVE
DNA-directed RNA polymerase subunit alpha
13_1_40cm_scaffold_1267_30
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

Not on your lists


14543..14989
DNA (447bp) protein (149aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 id=24436839 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
50S ribosomal protein L17
Displaying items 1-30 of 42 in total

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