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13_1_40cm_scaffold_1642

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1642_1
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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2..1441
DNA (1440bp) protein (480aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] id=24550749 bin=RBG_19FT_COMBO_GAL15_69_19 species=Archaeoglobus veneficus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative ABC transporter ATP-binding protein Tax=RBG_16_Armatimonadetes_67_12_curated
putative ABC transporter ATP-binding protein
13_1_40cm_scaffold_1642_2
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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1441..2499
DNA (1059bp) protein (353aa)
yufP; inner-membrane translocator Tax=RBG_16_Armatimonadetes_67_12_curated
ABC transporter permease; K02057 simple sugar transport system permease protein id=24550748 bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC transporter permease
13_1_40cm_scaffold_1642_3
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2499..4904
DNA (2406bp) protein (802aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ADU51591.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ADU51591.1};; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostri
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGD9_THEM7
13_1_40cm_scaffold_1642_4
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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4920..6023
DNA (1104bp) protein (368aa)
barbiturase (EC:3.5.2.1)
Barbiturase {ECO:0000313|EMBL:ABC20412.1}; EC=3.5.2.1 {ECO:0000313|EMBL:ABC20412.1};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella
Barbiturase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RGM7_MOOTA
13_1_40cm_scaffold_1642_5
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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6043..7053
DNA (1011bp) protein (337aa)
putative basic membrane lipoprotein; K07335 basic membrane protein A and related proteins Tax=RBG_16_Armatimonadetes_67_12_curated
putative basic membrane lipoprotein; K07335 basic membrane protein A and related proteins id=24550746 bin=RBG_19FT_COMBO_GAL15_69_19 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative basic membrane lipoprotein
13_1_40cm_scaffold_1642_6
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7050..7871
DNA (822bp) protein (274aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=RBG_13_Deltaproteobacteria_51_10_curated
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase id=4839861 bin=GWC2_Syntrophus__56_31 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_40cm_scaffold_1642_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7922..8983
DNA (1062bp) protein (354aa)
Putative neuraminidase n=1 Tax=uncultured bacterium 888 RepID=B8R8R8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETW97563.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
BNR repeat-containing glycosyl hydrolase
13_1_40cm_scaffold_1642_8
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9038..9571
DNA (534bp) protein (178aa)
Cupin 2 protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28N50_JANSC
cupin 2 protein
Cupin 2 protein {ECO:0000313|EMBL:ABD55862.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1
13_1_40cm_scaffold_1642_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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10051..10905
DNA (855bp) protein (285aa)
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
L-carnitine dehydratase/bile acid-inducible protein F id=2592712 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
L-carnitine dehydratase/bile acid-inducible protein F
13_1_40cm_scaffold_1642_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10928..12163)
DNA (1236bp) protein (412aa)
tartrate dehydrogenase (EC:4.1.1.73); K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] Tax=GWA2_Rokubacteria_73_35_curated
tartrate dehydrogenase (EC:4.1.1.73)
Tartrate dehydrogenase id=4468110 bin=GWC2_Methylomirabilis_70_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1642_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12213..13115)
DNA (903bp) protein (301aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Rhomboid family membrane protein id=2306563 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1642_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13131..13442)
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX02661.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Mandelate racemase
Mandelate racemase id=4897966 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1642_13
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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14423..15055
DNA (633bp) protein (211aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCS2_9BACT
NADP oxidoreductase, coenzyme F420-dependent; K06988 Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
NADP oxidoreductase, coenzyme F420-dependent
13_1_40cm_scaffold_1642_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15061..15957
DNA (897bp) protein (299aa)
aldo/keto reductase id=3139747 bin=GWF2_Methylomirabilis_70_14 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Tax=GWA2_Rokubacteria_70_23_curated
oxidoreductase, aryl-alcohol dehydrogenase like protein
13_1_40cm_scaffold_1642_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15965..16729)
DNA (765bp) protein (255aa)
Putative oxidoreductase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2R1_CALAS
putative oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative oxidoreductase
13_1_40cm_scaffold_1642_16
unknown

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17198..17389
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_scaffold_1642_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

17565..17885
DNA (321bp) protein (107aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Antibiotic biosynthesis monooxygenase domain-containing protein id=3139743 bin=GWF2_Methylomirabilis_70_14 species=Gordonia polyisoprenivorans genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
antibiotic biosynthesis monooxygenase
13_1_40cm_scaffold_1642_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17905..18861)
DNA (957bp) protein (319aa)
fumarylacetoacetate (FAA) hydrolase family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Fumarylacetoacetate (FAA) hydrolase family protein id=4695032 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fumarylacetoacetate (FAA) hydrolase family protein
13_1_40cm_scaffold_1642_19

Not on your lists

comp(18879..19043)
DNA (165bp) protein (55aa)
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 19 items

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