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13_1_40cm_scaffold_17290

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_17290_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3..374)
DNA (372bp) protein (124aa)
id=4485920 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=3068362 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_17290_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(446..859)
DNA (414bp) protein (138aa)
two-component system sensor protein (EC:2.7.3.-) Tax=GWA2_Rokubacteria_73_35_curated
cetoacetate metabolism regulatory protein atoC id=2772883 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
winged helix family two component transcriptional regulator
13_1_40cm_scaffold_17290_3
Pseudomonas savastanoi, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(870..1631)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Pseudomonas syringae pv. glycinea str. race 4 RepID=E7PTS7_PSESG
Uncharacterized protein {ECO:0000313|EMBL:EGH16042.1}; TaxID=875330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas savast
hypothetical protein
13_1_40cm_scaffold_17290_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1769..3064)
DNA (1296bp) protein (432aa)
serS; Seryl-tRNA synthetase (EC:6.1.1.11) Tax=GWC2_Rokubacteria_70_16_curated
Serine--tRNA ligase id=4391089 bin=GWC2_Methylomirabilis_70_16 species=Synergistes sp. 3_1_syn1 genus=Synergistes taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
seryl-tRNA synthetase
13_1_40cm_scaffold_17290_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3071..3574)
DNA (504bp) protein (168aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3) Tax=GWC2_Rokubacteria_70_16_curated
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A id=4391087 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_17290_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(3582..5417)
DNA (1836bp) protein (612aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3) Tax=GWA2_Rokubacteria_73_35_curated
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A id=2336356 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_17290_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5871..7823)
DNA (1953bp) protein (651aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B id=3325865 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_17290_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7820..8635)
DNA (816bp) protein (272aa)
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA replication and repair protein RecF id=3212580 bin=GWC2_Methylomirabilis_70_16 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
recF protein
Displaying 8 items

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